RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TIMM17AQ99595 171 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 MED14OSP0DP75 135 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 LY6HO94772 140 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 PRB1P04280 392 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 TMEM61Q8N0U2 210 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 IGHV3-33P01772 117 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 Q6JHZ5 121 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 COL27A1Q8IZC6 1860 aaPredicted RBP4.4□□□□□ -1.71
VCAN-201ENST00000265077 I3L2K1 104 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 K7ENP7 123 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 NXPH4O95158 308 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 UBE2D3P61077 147 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 UBE2D2P62837 147 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 IGHV3-16A0A0C4DH30 117 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 PDE6GP18545 87 aa4.4□□□□□ -1.71
VCAN-201ENST00000265077 MUC22E2RYF6 1773 aaPredicted RBP4.39□□□□□ -1.71
VCAN-201ENST00000265077 ZNF503-AS2A6NEH8 195 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 C11orf86A6NJI1 115 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 UBE2AP49459 152 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 MP68P56378 58 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 ITPR3Q14573 2671 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 TRBV7-3A0A075B6L6 115 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 GCN1Q92616 2671 aaKnown RBP4.39□□□□□ -1.71
VCAN-201ENST00000265077 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
VCAN-201ENST00000265077 RUSC1-AS1Q66K80 236 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 CRYGAP11844 174 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
VCAN-201ENST00000265077 SND1-IT1Q9HBX3 110 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 XCL2Q9UBD3 114 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 ODF3L1Q8IXM7 274 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 IGLV11-55A0A075B6I3 123 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 U3KQK5 164 aa4.39□□□□□ -1.71
VCAN-201ENST00000265077 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 TEX15Q9BXT5 2789 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 CFAP54Q96N23 3096 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 PROP1O75360 226 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 MIAQ16674 131 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 C11orf44Q8N8P7 122 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 A0A0J9YY99 117 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 H7C423 109 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 ENHOQ6UWT2 76 aa4.38□□□□□ -1.71
VCAN-201ENST00000265077 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
VCAN-201ENST00000265077 ANGP03950 147 aaKnown RBP4.37□□□□□ -1.71
VCAN-201ENST00000265077 HOXB4P17483 251 aaPredicted RBP4.37□□□□□ -1.71
VCAN-201ENST00000265077 SNURFQ9Y675 71 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 PATE2Q6UY27 113 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 IGHV7-81A0A0B4J1V7 117 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 LST1O00453 97 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 IGLV2-14P01704 120 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 C17orf77Q96MU5 243 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 IGHV3-38A0A0C4DH36 116 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 P0C879 139 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 FAM215AQ9Y5M1 114 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 TRAV7A0A075B6U4 112 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 PRO0461Q9UI25 63 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 COL4A4P53420 1690 aaPredicted RBP4.37□□□□□ -1.71
VCAN-201ENST00000265077 A6NED7 52 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 UBE2D1P51668 147 aa4.37□□□□□ -1.71
VCAN-201ENST00000265077 CTSGP08311 255 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 ZNF295-AS1Q8N0V1 137 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 HELZ2Q9BYK8 2649 aaKnown RBP4.36□□□□□ -1.71
VCAN-201ENST00000265077 TMEM256-PLSCR3K7ERE1 68 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 GNLYP22749 145 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 GNRH2O43555 120 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 PRSS33Q8NF86 280 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 FGF23Q9GZV9 251 aaPredicted RBP4.36□□□□□ -1.71
VCAN-201ENST00000265077 NOP10Q9NPE3 64 aaKnown RBP4.36□□□□□ -1.71
VCAN-201ENST00000265077 K7EMT4 169 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 EDN2P20800 178 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 C5orf38Q86SI9 138 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 BAHCC1Q9P281 2608 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 XCL1P47992 114 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 MSRB1Q9NZV6 116 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 GPHB5Q86YW7 130 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 PRB2P02812 416 aaPredicted RBP4.36□□□□□ -1.71
VCAN-201ENST00000265077 SOSTDC1Q6X4U4 206 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 LINC00574Q9H8X3 128 aa4.36□□□□□ -1.71
VCAN-201ENST00000265077 WI2-2373I1.2A0A1W2PRP0 233 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 TMEM263Q8WUH6 116 aaKnown RBP4.35□□□□□ -1.71
VCAN-201ENST00000265077 STAB1Q9NY15 2570 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 LECT2O14960 151 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 CEP350Q5VT06 3117 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
VCAN-201ENST00000265077 Q9HAA7 133 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 NDUFS5O43920 106 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 MIFP14174 115 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 CFHR3Q02985 330 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
VCAN-201ENST00000265077 NEXN-AS1Q8NBZ9 246 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 ZMAT4Q9H898 229 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 HIST2H2BCQ6DN03 193 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 HIST2H2BDQ6DRA6 164 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms