RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZFYVE26Q68DK2 2539 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 P0DMU3 169 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 FAM231AP0DMU4 169 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 FAM231CP0DMU5 169 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 HAMPP81172 84 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 CEMP1Q6PRD7 247 aaPredicted RBP10.52□□□□□ -0.73
CDH3-201ENST00000264012 TINCRA0A1B0GVN0 87 aa10.51□□□□□ -0.73
CDH3-201ENST00000264012 DSCR8Q96T75 97 aa10.51□□□□□ -0.73
CDH3-201ENST00000264012 SETD2Q9BYW2 2564 aaPredicted RBP10.51□□□□□ -0.73
CDH3-201ENST00000264012 TEN1Q86WV5 123 aa10.51□□□□□ -0.73
CDH3-201ENST00000264012 BAALC-AS2P0C853 105 aa10.51□□□□□ -0.73
CDH3-201ENST00000264012 WFDC2Q14508 124 aa10.51□□□□□ -0.73
CDH3-201ENST00000264012 PSMB8P28062 276 aa10.5□□□□□ -0.73
CDH3-201ENST00000264012 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
CDH3-201ENST00000264012 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
CDH3-201ENST00000264012 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
CDH3-201ENST00000264012 INAFM1C9JVW0 142 aa10.49□□□□□ -0.73
CDH3-201ENST00000264012 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
CDH3-201ENST00000264012 Q6ZUT4 128 aa10.49□□□□□ -0.73
CDH3-201ENST00000264012 KLK12Q9UKR0 248 aa10.49□□□□□ -0.73
CDH3-201ENST00000264012 UBE2BP63146 152 aa10.49□□□□□ -0.73
CDH3-201ENST00000264012 CITED1Q99966 193 aa10.49□□□□□ -0.73
CDH3-201ENST00000264012 PSMG3-AS1Q96PY0 264 aa10.48□□□□□ -0.73
CDH3-201ENST00000264012 ORMDL1Q9P0S3 153 aa10.48□□□□□ -0.73
CDH3-201ENST00000264012 F8W735 103 aaPredicted RBP10.48□□□□□ -0.73
CDH3-201ENST00000264012 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
CDH3-201ENST00000264012 ZNF702PQ9H963 129 aa10.48□□□□□ -0.73
CDH3-201ENST00000264012 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
CDH3-201ENST00000264012 ACYP1P07311 99 aa10.47□□□□□ -0.73
CDH3-201ENST00000264012 Q6ZS46 218 aa10.47□□□□□ -0.73
CDH3-201ENST00000264012 H0YGX0 51 aa10.47□□□□□ -0.73
CDH3-201ENST00000264012 FOXI1Q12951 378 aa10.46□□□□□ -0.73
CDH3-201ENST00000264012 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
CDH3-201ENST00000264012 NDUFA1O15239 70 aa10.46□□□□□ -0.74
CDH3-201ENST00000264012 SPAG11BQ08648 103 aa10.46□□□□□ -0.74
CDH3-201ENST00000264012 IL17DQ8TAD2 202 aa10.45□□□□□ -0.74
CDH3-201ENST00000264012 ATG2AQ2TAZ0 1938 aa10.45□□□□□ -0.74
CDH3-201ENST00000264012 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
CDH3-201ENST00000264012 HIST2H2BDQ6DRA6 164 aa10.45□□□□□ -0.74
CDH3-201ENST00000264012 CXCL5P42830 114 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 RBMY1FQ15415 496 aaKnown RBP10.44□□□□□ -0.74
CDH3-201ENST00000264012 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 B5MCH6 92 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 MIR7-3HGQ8N6C7 128 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 RBX1P62877 108 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 RNF185Q96GF1 192 aa10.44□□□□□ -0.74
CDH3-201ENST00000264012 AVPP01185 164 aa10.43□□□□□ -0.74
CDH3-201ENST00000264012 TRAV26-1A0A087WT03 109 aa10.43□□□□□ -0.74
CDH3-201ENST00000264012 CRYBA4P53673 196 aa10.43□□□□□ -0.74
CDH3-201ENST00000264012 LINC01006Q8NI28 216 aa10.43□□□□□ -0.74
CDH3-201ENST00000264012 COL5A1P20908 1838 aaPredicted RBP10.42□□□□□ -0.74
CDH3-201ENST00000264012 SMIM9A6NGZ8 99 aa10.42□□□□□ -0.74
CDH3-201ENST00000264012 M0QY20 66 aa10.42□□□□□ -0.74
CDH3-201ENST00000264012 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
CDH3-201ENST00000264012 LINC00467Q9BRT7 94 aa10.42□□□□□ -0.74
CDH3-201ENST00000264012 A0A1W2PPR1 153 aa10.41□□□□□ -0.74
CDH3-201ENST00000264012 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
CDH3-201ENST00000264012 U3KQK5 164 aa10.41□□□□□ -0.74
CDH3-201ENST00000264012 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
CDH3-201ENST00000264012 PRR9Q5T870 116 aa10.41□□□□□ -0.74
CDH3-201ENST00000264012 LYRM9A8MSI8 78 aa10.4□□□□□ -0.74
CDH3-201ENST00000264012 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
CDH3-201ENST00000264012 FN1P02751 2386 aaKnown RBP10.4□□□□□ -0.74
CDH3-201ENST00000264012 LY6G6DO95868 133 aa10.4□□□□□ -0.74
CDH3-201ENST00000264012 C18orf65Q6ZTR6 163 aa10.4□□□□□ -0.74
CDH3-201ENST00000264012 NFE4Q86UQ8 179 aa10.4□□□□□ -0.74
CDH3-201ENST00000264012 RS1O15537 224 aa10.4□□□□□ -0.75
CDH3-201ENST00000264012 LINC00482Q8N8I6 264 aa10.4□□□□□ -0.75
CDH3-201ENST00000264012 NCR3O14931 201 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 TRACP01848 142 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 RNASE3P12724 160 aaKnown RBP10.39□□□□□ -0.75
CDH3-201ENST00000264012 TIRAPP58753 221 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 LRRK2Q5S007 2527 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 C11orf45Q8TAV5 145 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
CDH3-201ENST00000264012 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 KLLNB2CW77 178 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 PROK1P58294 105 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 LECT2O14960 151 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 MIAQ16674 131 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 CLEC2BQ92478 149 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
CDH3-201ENST00000264012 DCANP1Q8TF63 244 aa10.37□□□□□ -0.75
CDH3-201ENST00000264012 ZNF22P17026 224 aaPredicted RBP10.37□□□□□ -0.75
CDH3-201ENST00000264012 TP73-AS1Q9UF72 201 aa10.37□□□□□ -0.75
CDH3-201ENST00000264012 TNRC6BQ9UPQ9 1833 aaKnown RBP10.37□□□□□ -0.75
CDH3-201ENST00000264012 H3BT86 120 aa10.37□□□□□ -0.75
CDH3-201ENST00000264012 KRTAP10-9P60411 292 aa10.37□□□□□ -0.75
CDH3-201ENST00000264012 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
CDH3-201ENST00000264012 HILS1P60008 231 aa10.36□□□□□ -0.75
CDH3-201ENST00000264012 REG3AQ06141 175 aa10.36□□□□□ -0.75
CDH3-201ENST00000264012 TRBV10-2A0A0K0K1G8 114 aa10.36□□□□□ -0.75
CDH3-201ENST00000264012 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms