RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ANAPC13Q9BS18 74 aa9.13□□□□□ -0.95
CHMP3-201ENST00000263856 RHOHQ15669 191 aa9.13□□□□□ -0.95
CHMP3-201ENST00000263856 RNF183Q96D59 192 aa9.13□□□□□ -0.95
CHMP3-201ENST00000263856 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 TEX49A0A1B0GTD5 131 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 NSUN5P1Q3KNT7 163 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 POM121L12Q8N7R1 296 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 TMEM263Q8WUH6 116 aaKnown RBP9.12□□□□□ -0.95
CHMP3-201ENST00000263856 ABCA12Q86UK0 2595 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 ZFYVE26Q68DK2 2539 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 RBMY1A1P0DJD3 496 aaKnown RBP9.12□□□□□ -0.95
CHMP3-201ENST00000263856 RBMY1CP0DJD4 496 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 RBMY1FQ15415 496 aaKnown RBP9.12□□□□□ -0.95
CHMP3-201ENST00000263856 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 K7EQG2 157 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 HOXD3P31249 432 aaPredicted RBP9.12□□□□□ -0.95
CHMP3-201ENST00000263856 SLURP1P55000 103 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 TCTEX1D4Q5JR98 221 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
CHMP3-201ENST00000263856 K7EMT4 169 aa9.11□□□□□ -0.95
CHMP3-201ENST00000263856 PSMB8P28062 276 aa9.11□□□□□ -0.95
CHMP3-201ENST00000263856 RPL32P62910 135 aaKnown RBP9.11□□□□□ -0.95
CHMP3-201ENST00000263856 C18orf65Q6ZTR6 163 aa9.11□□□□□ -0.95
CHMP3-201ENST00000263856 TEX29Q8N6K0 151 aa9.11□□□□□ -0.95
CHMP3-201ENST00000263856 TRIAP1O43715 76 aa9.11□□□□□ -0.95
CHMP3-201ENST00000263856 GATA3P23771 443 aa9.11□□□□□ -0.95
CHMP3-201ENST00000263856 TRGV11A0A075B6L2 103 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 ATXN8Q156A1 80 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 LINC01620Q4KN68 170 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 ADAMTSL4-AS1Q5T5F5 129 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 ZFAND6Q6FIF0 208 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 CFAP46Q8IYW2 2715 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 JMJD1CQ15652 2540 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 SNCGO76070 127 aa9.1□□□□□ -0.95
CHMP3-201ENST00000263856 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
CHMP3-201ENST00000263856 B4DSR2 109 aa9.09□□□□□ -0.95
CHMP3-201ENST00000263856 M0R2P5 195 aa9.09□□□□□ -0.95
CHMP3-201ENST00000263856 C2orf82Q6UX34 121 aa9.09□□□□□ -0.95
CHMP3-201ENST00000263856 LINC01587Q99440 93 aa9.09□□□□□ -0.95
CHMP3-201ENST00000263856 Q6ZSN1 163 aa9.09□□□□□ -0.95
CHMP3-201ENST00000263856 C11orf44Q8N8P7 122 aa9.09□□□□□ -0.95
CHMP3-201ENST00000263856 LRRK2Q5S007 2527 aa9.08□□□□□ -0.96
CHMP3-201ENST00000263856 MXRA5Q9NR99 2828 aa9.08□□□□□ -0.96
CHMP3-201ENST00000263856 CFHR3Q02985 330 aa9.08□□□□□ -0.96
CHMP3-201ENST00000263856 CCDC168Q8NDH2 2452 aa9.08□□□□□ -0.96
CHMP3-201ENST00000263856 IGHV3-53P01767 116 aa9.08□□□□□ -0.96
CHMP3-201ENST00000263856 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 A0A0B4J2C4 111 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 CRLF1O75462 422 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 EPG5Q9HCE0 2579 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 FBN2P35556 2912 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 NAV2Q8IVL1 2488 aa9.07□□□□□ -0.96
CHMP3-201ENST00000263856 CHD6Q8TD26 2715 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 DOPEY1Q5JWR5 2465 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 H3BMM0 161 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 COX6CP09669 75 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 RPL13AP40429 203 aaKnown RBP9.06□□□□□ -0.96
CHMP3-201ENST00000263856 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 IGHV1-58A0A0C4DH39 117 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 XCL2Q9UBD3 114 aa9.06□□□□□ -0.96
CHMP3-201ENST00000263856 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
CHMP3-201ENST00000263856 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
CHMP3-201ENST00000263856 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
CHMP3-201ENST00000263856 B5MCH6 92 aa9.05□□□□□ -0.96
CHMP3-201ENST00000263856 TRAV13-1A0A0B4J241 112 aa9.04□□□□□ -0.96
CHMP3-201ENST00000263856 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
CHMP3-201ENST00000263856 NDUFA7O95182 113 aa9.04□□□□□ -0.96
CHMP3-201ENST00000263856 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
CHMP3-201ENST00000263856 TMEM61Q8N0U2 210 aa9.04□□□□□ -0.96
CHMP3-201ENST00000263856 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
CHMP3-201ENST00000263856 A0A1W2PRX2 142 aa9.03□□□□□ -0.96
CHMP3-201ENST00000263856 RBMY1BA6NDE4 496 aaKnown RBP9.03□□□□□ -0.96
CHMP3-201ENST00000263856 RBMY1EA6NEQ0 496 aaKnown RBP9.03□□□□□ -0.96
CHMP3-201ENST00000263856 RBMY1DP0C7P1 496 aaKnown RBP9.03□□□□□ -0.96
CHMP3-201ENST00000263856 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
CHMP3-201ENST00000263856 BRI3O95415 125 aa9.03□□□□□ -0.96
CHMP3-201ENST00000263856 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
CHMP3-201ENST00000263856 ZNF415Q09FC8 603 aa9.03□□□□□ -0.96
CHMP3-201ENST00000263856 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
CHMP3-201ENST00000263856 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
CHMP3-201ENST00000263856 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.96
CHMP3-201ENST00000263856 LITAFQ99732 161 aa9.02□□□□□ -0.97
CHMP3-201ENST00000263856 UBE2D4Q9Y2X8 147 aa9.02□□□□□ -0.97
CHMP3-201ENST00000263856 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
CHMP3-201ENST00000263856 MIAQ16674 131 aa9.02□□□□□ -0.97
CHMP3-201ENST00000263856 Q9H8V8 135 aa9.02□□□□□ -0.97
CHMP3-201ENST00000263856 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
CHMP3-201ENST00000263856 CHCHD7Q9BUK0 85 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms