RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 H3BUA1 57 aa6.71□□□□□ -1.33
MSH4-201ENST00000263187 K7EQG2 157 aa6.71□□□□□ -1.33
MSH4-201ENST00000263187 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.33
MSH4-201ENST00000263187 C9orf85Q96MD7 179 aa6.71□□□□□ -1.33
MSH4-201ENST00000263187 AMELXQ99217 191 aa6.71□□□□□ -1.33
MSH4-201ENST00000263187 C1QTNF4Q9BXJ3 329 aa6.71□□□□□ -1.33
MSH4-201ENST00000263187 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.33
MSH4-201ENST00000263187 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.34
MSH4-201ENST00000263187 CARD19Q96LW7 228 aa6.71□□□□□ -1.34
MSH4-201ENST00000263187 ATP6V0BQ99437 205 aa6.71□□□□□ -1.34
MSH4-201ENST00000263187 TIMM17AQ99595 171 aa6.71□□□□□ -1.34
MSH4-201ENST00000263187 FLNAP21333 2647 aaKnown RBP6.71□□□□□ -1.34
MSH4-201ENST00000263187 IGLV4-3A0A075B6K6 122 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 I3L3M4 83 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 SPINK8P0C7L1 97 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
MSH4-201ENST00000263187 RHODO00212 210 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 K7EMT4 169 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 ANKRD29Q8N6D5 301 aa6.7□□□□□ -1.34
MSH4-201ENST00000263187 A0A1W2PRX2 142 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 TMEM223A0PJW6 202 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 TNFRSF18Q9Y5U5 241 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 ITPR3Q14573 2671 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 NOTCH2Q04721 2471 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 UBE2D3P61077 147 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 UBE2D2P62837 147 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 UBE2E2Q96LR5 201 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 APCP25054 2843 aa6.69□□□□□ -1.34
MSH4-201ENST00000263187 A8MWV9 139 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 XGP55808 180 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 ADAMTSL4-AS1Q5T5F5 129 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
MSH4-201ENST00000263187 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
MSH4-201ENST00000263187 LINC01619G3V211 115 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
MSH4-201ENST00000263187 LINC01587Q99440 93 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 XCL2Q9UBD3 114 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 ERG28Q9UKR5 140 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
MSH4-201ENST00000263187 NDUFA7O95182 113 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 CKS1BP61024 79 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 TMEM61Q8N0U2 210 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
MSH4-201ENST00000263187 TRBV7-9A0A0J9YWB2 115 aa6.67□□□□□ -1.34
MSH4-201ENST00000263187 A0A0J9YXY3 114 aa6.67□□□□□ -1.34
MSH4-201ENST00000263187 LEPROTO15243 131 aa6.67□□□□□ -1.34
MSH4-201ENST00000263187 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
MSH4-201ENST00000263187 KRTAP10-9P60411 292 aa6.67□□□□□ -1.34
MSH4-201ENST00000263187 SLC25A20O43772 301 aa6.67□□□□□ -1.34
MSH4-201ENST00000263187 IGHV3-33P01772 117 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 NSUN5P1Q3KNT7 163 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 Q6ZUT4 128 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 TEN1Q86WV5 123 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 LINC01356Q8N9X3 169 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 J3QKU1 62 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 TMEM263Q8WUH6 116 aaKnown RBP6.66□□□□□ -1.34
MSH4-201ENST00000263187 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 LINC00467Q9BRT7 94 aa6.66□□□□□ -1.34
MSH4-201ENST00000263187 TRGV11A0A075B6L2 103 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 BRI3O95415 125 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 RHOHQ15669 191 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 NTN5Q8WTR8 489 aaPredicted RBP6.65□□□□□ -1.34
MSH4-201ENST00000263187 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 TEX49A0A1B0GTD5 131 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 CIDEAO60543 219 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
MSH4-201ENST00000263187 PPDPFLQ8WWR9 84 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 CLEC2BQ92478 149 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 ZNF702PQ9H963 129 aa6.65□□□□□ -1.34
MSH4-201ENST00000263187 H3BMM0 161 aa6.65□□□□□ -1.35
MSH4-201ENST00000263187 DYNLRB2Q8TF09 96 aa6.65□□□□□ -1.35
MSH4-201ENST00000263187 VPREB3Q9UKI3 123 aa6.65□□□□□ -1.35
MSH4-201ENST00000263187 TRIAP1O43715 76 aa6.64□□□□□ -1.35
MSH4-201ENST00000263187 HIVEP2P31629 2446 aa6.64□□□□□ -1.35
MSH4-201ENST00000263187 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
MSH4-201ENST00000263187 DGAT2L7PQ6IED9 249 aa6.64□□□□□ -1.35
MSH4-201ENST00000263187 GEMIN7Q9H840 131 aaKnown RBP6.64□□□□□ -1.35
MSH4-201ENST00000263187 IGKV3OR2-268A0A0C4DH90 116 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
MSH4-201ENST00000263187 TRBV20-1A0A075B6N2 111 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 A0A1B0GV72 72 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
MSH4-201ENST00000263187 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
MSH4-201ENST00000263187 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
MSH4-201ENST00000263187 M0R2P5 195 aa6.62□□□□□ -1.35
MSH4-201ENST00000263187 COX6A2Q02221 97 aa6.62□□□□□ -1.35
MSH4-201ENST00000263187 CHCHD7Q9BUK0 85 aa6.62□□□□□ -1.35
MSH4-201ENST00000263187 CRYBA4P53673 196 aa6.62□□□□□ -1.35
MSH4-201ENST00000263187 GATA3P23771 443 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms