RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 GP9P14770 177 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 RPL18AQ02543 176 aaKnown RBP6.41□□□□□ -1.38
LDB3-201ENST00000263066 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 ZMAT4Q9H898 229 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 TRBV7-7A0A0K0K1E9 115 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 KRTAP27-1Q3LI81 207 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 TRAV12-1A0A0B4J245 112 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 GHRHP01286 108 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 HTN1P15515 57 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 C20orf173Q96LM9 149 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 DPM3Q9P2X0 92 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 CTSZQ9UBR2 303 aa6.41□□□□□ -1.38
LDB3-201ENST00000263066 IGHV3-30P01768 117 aa6.4□□□□□ -1.38
LDB3-201ENST00000263066 IGHV3-30-5P0DP03 117 aa6.4□□□□□ -1.38
LDB3-201ENST00000263066 SLC25A29Q8N8R3 303 aa6.4□□□□□ -1.38
LDB3-201ENST00000263066 GAFA1Q96PS6 74 aa6.4□□□□□ -1.38
LDB3-201ENST00000263066 IGLV3-9A0A075B6K5 115 aa6.4□□□□□ -1.38
LDB3-201ENST00000263066 CRIP1P50238 77 aa6.4□□□□□ -1.38
LDB3-201ENST00000263066 B4DSR2 109 aa6.4□□□□□ -1.39
LDB3-201ENST00000263066 USP17L23D6RBM5 183 aa6.4□□□□□ -1.39
LDB3-201ENST00000263066 CRYGAP11844 174 aa6.4□□□□□ -1.39
LDB3-201ENST00000263066 HOXD3P31249 432 aaPredicted RBP6.39□□□□□ -1.39
LDB3-201ENST00000263066 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 C11orf68Q9H3H3 251 aaKnown RBP6.39□□□□□ -1.39
LDB3-201ENST00000263066 IGHG2P01859 326 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 SAA4P35542 130 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 FAM240AA0A1B0GVK7 77 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 ELANEP08246 267 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 P0DMU3 169 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
LDB3-201ENST00000263066 DEFB113Q30KQ7 82 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
LDB3-201ENST00000263066 DYNAPQ8N1N2 210 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 DAZ1Q9NQZ3 744 aaKnown RBP6.39□□□□□ -1.39
LDB3-201ENST00000263066 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
LDB3-201ENST00000263066 NDUFA4L2Q9NRX3 87 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 U3KQK5 164 aa6.39□□□□□ -1.39
LDB3-201ENST00000263066 MSMBP08118 114 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 DGAT2L7PQ6IED9 249 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 C11orf53Q8IXP5 236 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 DAND5Q8N907 189 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
LDB3-201ENST00000263066 SHANK2-AS3Q9BTD1 123 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 DPH3P1Q9H4G8 78 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 MRPL55Q7Z7F7 128 aaKnown RBP6.38□□□□□ -1.39
LDB3-201ENST00000263066 SBSPONQ8IVN8 264 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 FAM223AQ8IWN6 122 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 TIMM17BO60830 172 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
LDB3-201ENST00000263066 E7EUB6 86 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 IGHV1-8P0DP01 117 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 LINC01619G3V211 115 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 C15orf65H3BRN8 121 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 SLC50A1Q9BRV3 221 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 IGHV4-38-2P0DP08 117 aa6.37□□□□□ -1.39
LDB3-201ENST00000263066 ZFP36P26651 326 aaKnown RBP6.37□□□□□ -1.39
LDB3-201ENST00000263066 TRBV7-1A0A0A6YYK4 115 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 RPL39P62891 51 aaKnown RBP6.36□□□□□ -1.39
LDB3-201ENST00000263066 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 I3L3M4 83 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 LINC00311Q8N616 119 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 ZANQ9Y493 2812 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 TRAV12-2A0A075B6T6 113 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 IGKV3-20P01619 116 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 EIF4EBP1Q13541 118 aaPredicted RBP6.36□□□□□ -1.39
LDB3-201ENST00000263066 SOSTDC1Q6X4U4 206 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 Q6ZSV7 163 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 NEXN-AS1Q8NBZ9 246 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 C9orf85Q96MD7 179 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 Q9HAA7 133 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 TPSG1Q9NRR2 321 aa6.36□□□□□ -1.39
LDB3-201ENST00000263066 IGKV1D-37A0A075B6S9 117 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 NXPH4O95158 308 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 THAP8Q8NA92 274 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 TMEM263Q8WUH6 116 aaKnown RBP6.35□□□□□ -1.39
LDB3-201ENST00000263066 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 PPP1R17O96001 155 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 ZNF80P51504 273 aaPredicted RBP6.35□□□□□ -1.39
LDB3-201ENST00000263066 C14orf132Q9NPU4 83 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 SNURFQ9Y675 71 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 NDUFC2-KCTD14E9PQ53 114 aa6.35□□□□□ -1.39
LDB3-201ENST00000263066 SOCS3O14543 225 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 TET2Q6N021 2002 aaPredicted RBP6.34□□□□□ -1.39
LDB3-201ENST00000263066 CD28P10747 220 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 LINC01356Q8N9X3 169 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 TOMM6Q96B49 74 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 INAFM1C9JVW0 142 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 TMEM86BQ8N661 226 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 TMEM167AQ8TBQ9 72 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 FANCD2OSQ96PS1 177 aa6.34□□□□□ -1.39
LDB3-201ENST00000263066 A0A087WWL8 130 aa6.33□□□□□ -1.4
LDB3-201ENST00000263066 IGHV4-59P01825 116 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms