RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 ODF3L2Q3SX64 289 aa11.74□□□□□ -0.53
SYT1-201ENST00000261205 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
SYT1-201ENST00000261205 C9orf85Q96MD7 179 aa11.73□□□□□ -0.53
SYT1-201ENST00000261205 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
SYT1-201ENST00000261205 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
SYT1-201ENST00000261205 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
SYT1-201ENST00000261205 M0QY20 66 aa11.72□□□□□ -0.53
SYT1-201ENST00000261205 CEND1Q8N111 149 aa11.72□□□□□ -0.53
SYT1-201ENST00000261205 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
SYT1-201ENST00000261205 SORL1Q92673 2214 aa11.72□□□□□ -0.53
SYT1-201ENST00000261205 IGLV10-54A0A075B6I4 117 aa11.71□□□□□ -0.53
SYT1-201ENST00000261205 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
SYT1-201ENST00000261205 TTC32Q5I0X7 151 aa11.71□□□□□ -0.53
SYT1-201ENST00000261205 E9PLD3 99 aa11.71□□□□□ -0.54
SYT1-201ENST00000261205 IGHV4-30-4P0DP06 118 aa11.71□□□□□ -0.54
SYT1-201ENST00000261205 RNASE3P12724 160 aaKnown RBP11.71□□□□□ -0.54
SYT1-201ENST00000261205 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.54
SYT1-201ENST00000261205 EDA2RQ9HAV5 297 aa11.7□□□□□ -0.54
SYT1-201ENST00000261205 NPSP0C0P6 89 aa11.7□□□□□ -0.54
SYT1-201ENST00000261205 COX8CQ7Z4L0 72 aa11.7□□□□□ -0.54
SYT1-201ENST00000261205 CNFNQ9BYD5 112 aa11.7□□□□□ -0.54
SYT1-201ENST00000261205 U3KQK5 164 aa11.7□□□□□ -0.54
SYT1-201ENST00000261205 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
SYT1-201ENST00000261205 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
SYT1-201ENST00000261205 NACAE9PAV3 2078 aa11.69□□□□□ -0.54
SYT1-201ENST00000261205 OXLD1Q5BKU9 147 aa11.69□□□□□ -0.54
SYT1-201ENST00000261205 TRBV27A0A0K0K1C4 114 aa11.69□□□□□ -0.54
SYT1-201ENST00000261205 SNHG12Q9BXW3 62 aa11.69□□□□□ -0.54
SYT1-201ENST00000261205 NUPR1O60356 82 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 IGHV1-58A0A0C4DH39 117 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 UBE2BP63146 152 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 SCRT2Q9NQ03 307 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 FRMD6-AS1P0C7T7 363 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 ODF1Q14990 250 aa11.68□□□□□ -0.54
SYT1-201ENST00000261205 FSHBP01225 129 aa11.67□□□□□ -0.54
SYT1-201ENST00000261205 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
SYT1-201ENST00000261205 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
SYT1-201ENST00000261205 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
SYT1-201ENST00000261205 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
SYT1-201ENST00000261205 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
SYT1-201ENST00000261205 DLEU1O43261 78 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 PYGO1Q9Y3Y4 419 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 PRR9Q5T870 116 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 LINC00173Q6ZV60 143 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 SOCS3O14543 225 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 REG3AQ06141 175 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
SYT1-201ENST00000261205 WFDC10AQ9H1F0 79 aa11.65□□□□□ -0.54
SYT1-201ENST00000261205 UTRNP46939 3433 aa11.65□□□□□ -0.54
SYT1-201ENST00000261205 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
SYT1-201ENST00000261205 C11orf21Q9P2W6 132 aa11.65□□□□□ -0.54
SYT1-201ENST00000261205 P0DMU3 169 aa11.65□□□□□ -0.55
SYT1-201ENST00000261205 FAM231AP0DMU4 169 aa11.65□□□□□ -0.55
SYT1-201ENST00000261205 FAM231CP0DMU5 169 aa11.65□□□□□ -0.55
SYT1-201ENST00000261205 Q6ZUT4 128 aa11.65□□□□□ -0.55
SYT1-201ENST00000261205 RNF183Q96D59 192 aa11.65□□□□□ -0.55
SYT1-201ENST00000261205 LINC00467Q9BRT7 94 aa11.64□□□□□ -0.55
SYT1-201ENST00000261205 FN1P02751 2386 aaKnown RBP11.64□□□□□ -0.55
SYT1-201ENST00000261205 RPL18AQ02543 176 aaKnown RBP11.64□□□□□ -0.55
SYT1-201ENST00000261205 TMEM126AQ9H061 195 aa11.64□□□□□ -0.55
SYT1-201ENST00000261205 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 PCP2Q8IVA1 136 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 YPEL4Q96NS1 127 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 CRYGDP07320 174 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 GAGE12HA6NDE8 117 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 C9JAW5 83 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 UBE2V1Q13404 147 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 LELP1Q5T871 98 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 HIST2H2BDQ6DRA6 164 aa11.63□□□□□ -0.55
SYT1-201ENST00000261205 NAA38Q9BRA0 125 aaKnown RBP11.63□□□□□ -0.55
SYT1-201ENST00000261205 H0YGX0 51 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 H3BQ85 93 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 TIRAPP58753 221 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 ANKRD39Q53RE8 183 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 CFC1P0CG37 223 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 NFE4Q86UQ8 179 aa11.62□□□□□ -0.55
SYT1-201ENST00000261205 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
SYT1-201ENST00000261205 C12orf74Q32Q52 190 aa11.61□□□□□ -0.55
SYT1-201ENST00000261205 PTH2Q96A98 100 aa11.61□□□□□ -0.55
SYT1-201ENST00000261205 KPRPQ5T749 579 aaPredicted RBP11.61□□□□□ -0.55
SYT1-201ENST00000261205 MIAQ16674 131 aa11.6□□□□□ -0.55
SYT1-201ENST00000261205 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
SYT1-201ENST00000261205 ETDCA0A1B0GVM5 59 aa11.6□□□□□ -0.55
SYT1-201ENST00000261205 UFSP1Q6NVU6 142 aa11.6□□□□□ -0.55
SYT1-201ENST00000261205 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
SYT1-201ENST00000261205 IGLV4-3A0A075B6K6 122 aa11.59□□□□□ -0.55
SYT1-201ENST00000261205 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
SYT1-201ENST00000261205 CHCHD7Q9BUK0 85 aa11.59□□□□□ -0.55
SYT1-201ENST00000261205 GAGE2EQ4V326 116 aa11.58□□□□□ -0.56
SYT1-201ENST00000261205 GAGE2DQ9UEU5 116 aa11.58□□□□□ -0.56
SYT1-201ENST00000261205 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
SYT1-201ENST00000261205 ANKRD17O75179 2603 aaKnown RBP11.58□□□□□ -0.56
SYT1-201ENST00000261205 MAJINQ3KP22 176 aa11.58□□□□□ -0.56
SYT1-201ENST00000261205 NRACQ8N912 160 aa11.58□□□□□ -0.56
SYT1-201ENST00000261205 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms