RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PROK1P58294 105 aa9.09□□□□□ -0.95
COL8A1-201ENST00000261037 IGKV4-1P06312 121 aa9.09□□□□□ -0.95
COL8A1-201ENST00000261037 FAM19A1Q7Z5A9 133 aa9.09□□□□□ -0.95
COL8A1-201ENST00000261037 TRBV10-1A0A0K0K1A3 114 aa9.09□□□□□ -0.95
COL8A1-201ENST00000261037 DEFB114Q30KQ6 69 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 SCXQ7RTU7 201 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 FAM19A5Q7Z5A7 132 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-201ENST00000261037 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-201ENST00000261037 DEFB131BA0A096LNP1 70 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 P0C879 139 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 TRAV23DV6A0A075B6W5 121 aa9.08□□□□□ -0.96
COL8A1-201ENST00000261037 A0A087WZ39 114 aa9.07□□□□□ -0.96
COL8A1-201ENST00000261037 A0A1B0GXF2 115 aa9.07□□□□□ -0.96
COL8A1-201ENST00000261037 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
COL8A1-201ENST00000261037 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
COL8A1-201ENST00000261037 SPATA12Q7Z6I5 190 aa9.06□□□□□ -0.96
COL8A1-201ENST00000261037 LRRC75A-AS1Q8N1F1 130 aa9.06□□□□□ -0.96
COL8A1-201ENST00000261037 K7EQG2 157 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 HILS1P60008 231 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 CFAP126Q5VTH2 177 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 H3BT86 120 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 C18orf65Q6ZTR6 163 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 NACAE9PAV3 2078 aa9.05□□□□□ -0.96
COL8A1-201ENST00000261037 PIK3CD-AS1Q5SR53 167 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 Q6ZSV7 163 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 G3V4G9 280 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
COL8A1-201ENST00000261037 MUC22E2RYF6 1773 aaPredicted RBP9.03□□□□□ -0.96
COL8A1-201ENST00000261037 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 ARHGAP21Q5T5U3 1957 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 M0R2N4 97 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 CRIP3Q6Q6R5 217 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 NUP210LQ5VU65 1888 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 BPY2O14599 106 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
COL8A1-201ENST00000261037 CHD3Q12873 2000 aaKnown RBP9.03□□□□□ -0.96
COL8A1-201ENST00000261037 IGLV4-3A0A075B6K6 122 aa9.02□□□□□ -0.96
COL8A1-201ENST00000261037 TEX49A0A1B0GTD5 131 aa9.02□□□□□ -0.96
COL8A1-201ENST00000261037 A8MZ25 164 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 LY6G6DO95868 133 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 ABCA1O95477 2261 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 CRIP1P50238 77 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 SEC61GP60059 68 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 ZNF843Q8N446 348 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 BBC3Q96PG8 261 aaPredicted RBP9.02□□□□□ -0.97
COL8A1-201ENST00000261037 ZFAND3Q9H8U3 227 aa9.02□□□□□ -0.97
COL8A1-201ENST00000261037 PCDH15Q96QU1 1955 aa9.01□□□□□ -0.97
COL8A1-201ENST00000261037 PRM2P04554 102 aa9.01□□□□□ -0.97
COL8A1-201ENST00000261037 ZNF22P17026 224 aaPredicted RBP9.01□□□□□ -0.97
COL8A1-201ENST00000261037 J3KT08 172 aa9.01□□□□□ -0.97
COL8A1-201ENST00000261037 EIF4EBP1Q13541 118 aaPredicted RBP9.01□□□□□ -0.97
COL8A1-201ENST00000261037 Q8N976 141 aa9.01□□□□□ -0.97
COL8A1-201ENST00000261037 LY6LH3BQJ8 138 aa9.01□□□□□ -0.97
COL8A1-201ENST00000261037 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 WFDC10BQ8IUB3 73 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 BDP1A6H8Y1 2624 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 NDUFC2O95298 119 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 MAPKAPK5-AS1Q8N8E1 139 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 CEP192Q8TEP8 1941 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
COL8A1-201ENST00000261037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.99□□□□□ -0.97
COL8A1-201ENST00000261037 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 A0A0J9YWU9 116 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 PPDPFQ9H3Y8 114 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 M0QY20 66 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 C11orf71Q6IPW1 123 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 ZNF702PQ9H963 129 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 RNF185Q96GF1 192 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
COL8A1-201ENST00000261037 CASC2Q6XLA1 102 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 MPLKIPQ8TAP9 179 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 PTPRSQ13332 1948 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 H7C423 109 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 Q6ZS46 218 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.98□□□□□ -0.97
COL8A1-201ENST00000261037 MBD6Q96DN6 1003 aa8.98□□□□□ -0.97
COL8A1-201ENST00000261037 BRK1Q8WUW1 75 aa8.97□□□□□ -0.97
COL8A1-201ENST00000261037 MT-ATP8P03928 68 aa8.97□□□□□ -0.97
COL8A1-201ENST00000261037 PDE6GP18545 87 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms