RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
TUBGCP4-201ENST00000260383 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
TUBGCP4-201ENST00000260383 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
TUBGCP4-201ENST00000260383 CD28P10747 220 aa9.79□□□□□ -0.84
TUBGCP4-201ENST00000260383 MRPS36P82909 103 aaKnown RBP9.79□□□□□ -0.84
TUBGCP4-201ENST00000260383 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
TUBGCP4-201ENST00000260383 TRACP01848 142 aa9.78□□□□□ -0.84
TUBGCP4-201ENST00000260383 TRBV12-3P01733 135 aa9.78□□□□□ -0.84
TUBGCP4-201ENST00000260383 DEFB124Q8NES8 71 aa9.78□□□□□ -0.84
TUBGCP4-201ENST00000260383 BAALC-AS2P0C853 105 aa9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 BEAN1Q3B7T3 259 aa9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 GVINP1Q7Z2Y8 2422 aa9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGHV3OR16-10A0A075B7F0 116 aa9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 A0A0U1RRA0 63 aa9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 COX7A2LO14548 114 aa9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.85
TUBGCP4-201ENST00000260383 B9A039 149 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 ATOX1O00244 68 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGF2-ASQ6U949 168 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 FAM218AQ96MZ4 157 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 KLK9Q9UKQ9 250 aa9.76□□□□□ -0.85
TUBGCP4-201ENST00000260383 KLLNB2CW77 178 aa9.75□□□□□ -0.85
TUBGCP4-201ENST00000260383 KLRB1Q12918 225 aa9.75□□□□□ -0.85
TUBGCP4-201ENST00000260383 MINOS1Q5TGZ0 78 aa9.75□□□□□ -0.85
TUBGCP4-201ENST00000260383 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
TUBGCP4-201ENST00000260383 HRNRQ86YZ3 2850 aaPredicted RBP9.74□□□□□ -0.85
TUBGCP4-201ENST00000260383 A0A087WVE0 104 aa9.74□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGHG2P01859 326 aa9.74□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 F5H768 121 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 Q5XG85 94 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 RNF152Q8N8N0 203 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 ANKRD11Q6UB99 2663 aaPredicted RBP9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 Q9HAA7 133 aa9.73□□□□□ -0.85
TUBGCP4-201ENST00000260383 PTPRZ1P23471 2315 aaPredicted RBP9.72□□□□□ -0.85
TUBGCP4-201ENST00000260383 TRAV12-2A0A075B6T6 113 aa9.72□□□□□ -0.85
TUBGCP4-201ENST00000260383 C9orf85Q96MD7 179 aa9.72□□□□□ -0.85
TUBGCP4-201ENST00000260383 TMEM258P61165 79 aa9.72□□□□□ -0.85
TUBGCP4-201ENST00000260383 SOSTDC1Q6X4U4 206 aa9.72□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGHV3-73A0A0B4J1V6 119 aa9.71□□□□□ -0.85
TUBGCP4-201ENST00000260383 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.85
TUBGCP4-201ENST00000260383 Q9UF83 564 aa9.71□□□□□ -0.85
TUBGCP4-201ENST00000260383 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.85
TUBGCP4-201ENST00000260383 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
TUBGCP4-201ENST00000260383 EDN2P20800 178 aa9.71□□□□□ -0.86
TUBGCP4-201ENST00000260383 PROK1P58294 105 aa9.71□□□□□ -0.86
TUBGCP4-201ENST00000260383 TINCRA0A1B0GVN0 87 aa9.7□□□□□ -0.86
TUBGCP4-201ENST00000260383 TIMM17BO60830 172 aa9.7□□□□□ -0.86
TUBGCP4-201ENST00000260383 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.7□□□□□ -0.86
TUBGCP4-201ENST00000260383 CDKN2A-AS1Q9UH64 79 aa9.7□□□□□ -0.86
TUBGCP4-201ENST00000260383 COL12A1Q99715 3063 aa9.7□□□□□ -0.86
TUBGCP4-201ENST00000260383 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
TUBGCP4-201ENST00000260383 SERP2Q8N6R1 65 aa9.69□□□□□ -0.86
TUBGCP4-201ENST00000260383 ZFP36P26651 326 aaKnown RBP9.69□□□□□ -0.86
TUBGCP4-201ENST00000260383 MINOS1-NBL1R4GNA1 71 aa9.69□□□□□ -0.86
TUBGCP4-201ENST00000260383 IGHV3-11P01762 117 aa9.69□□□□□ -0.86
TUBGCP4-201ENST00000260383 IGFL3Q6UXB1 125 aa9.69□□□□□ -0.86
TUBGCP4-201ENST00000260383 LINC01560Q8TB33 94 aa9.69□□□□□ -0.86
TUBGCP4-201ENST00000260383 ANKHD1Q8IWZ3 2542 aaKnown RBP9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 NDUFA1O15239 70 aa9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 Q9H8V8 135 aa9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 INAFM2P0DMQ5 153 aa9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
TUBGCP4-201ENST00000260383 MALP21145 153 aa9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 NDUFA4O00483 81 aa9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 C10orf105Q8TEF2 133 aa9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 C14orf132Q9NPU4 83 aa9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
TUBGCP4-201ENST00000260383 PTPRQQ9UMZ3 2332 aa9.66□□□□□ -0.86
TUBGCP4-201ENST00000260383 NBL1P41271 181 aa9.66□□□□□ -0.86
TUBGCP4-201ENST00000260383 COX6A2Q02221 97 aa9.66□□□□□ -0.86
TUBGCP4-201ENST00000260383 PRIMA1Q86XR5 153 aa9.66□□□□□ -0.86
TUBGCP4-201ENST00000260383 UBE2D4Q9Y2X8 147 aa9.66□□□□□ -0.86
TUBGCP4-201ENST00000260383 SORL1Q92673 2214 aa9.66□□□□□ -0.86
TUBGCP4-201ENST00000260383 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
TUBGCP4-201ENST00000260383 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
TUBGCP4-201ENST00000260383 ACACAQ13085 2346 aa9.65□□□□□ -0.87
TUBGCP4-201ENST00000260383 SAA4P35542 130 aa9.65□□□□□ -0.87
TUBGCP4-201ENST00000260383 FHL2Q14192 279 aa9.65□□□□□ -0.87
TUBGCP4-201ENST00000260383 C5orf56Q8N8D9 126 aa9.65□□□□□ -0.87
TUBGCP4-201ENST00000260383 DNAL4O96015 105 aa9.64□□□□□ -0.87
TUBGCP4-201ENST00000260383 SYNJ2BPP57105 145 aa9.64□□□□□ -0.87
TUBGCP4-201ENST00000260383 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
TUBGCP4-201ENST00000260383 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
TUBGCP4-201ENST00000260383 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
TUBGCP4-201ENST00000260383 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
TUBGCP4-201ENST00000260383 LINC00467Q9BRT7 94 aa9.63□□□□□ -0.87
TUBGCP4-201ENST00000260383 COL6A6A6NMZ7 2263 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms