RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SPRY2O43597 315 aa14.86□□□□□ -0.03
HOXC13-201ENST00000243056 CLEC2BQ92478 149 aa14.85□□□□□ -0.03
HOXC13-201ENST00000243056 SPANXN1Q5VSR9 72 aa14.85□□□□□ -0.03
HOXC13-201ENST00000243056 LGALS3P17931 250 aaKnown RBP14.84□□□□□ -0.03
HOXC13-201ENST00000243056 SLC50A1Q9BRV3 221 aa14.84□□□□□ -0.03
HOXC13-201ENST00000243056 SMAD5-AS1Q9Y6J3 95 aa14.84□□□□□ -0.03
HOXC13-201ENST00000243056 NDPQ00604 133 aa14.84□□□□□ -0.03
HOXC13-201ENST00000243056 DPH3Q96FX2 82 aa14.84□□□□□ -0.03
HOXC13-201ENST00000243056 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.83□□□□□ -0.04
HOXC13-201ENST00000243056 Q5XG85 94 aa14.83□□□□□ -0.04
HOXC13-201ENST00000243056 SMR3AQ99954 134 aa14.83□□□□□ -0.04
HOXC13-201ENST00000243056 ICOSQ9Y6W8 199 aa14.83□□□□□ -0.04
HOXC13-201ENST00000243056 BAHCC1Q9P281 2608 aa14.83□□□□□ -0.04
HOXC13-201ENST00000243056 Q8N6K4 173 aa14.83□□□□□ -0.04
HOXC13-201ENST00000243056 ZNF256Q9Y2P7 627 aaPredicted RBP14.83□□□□□ -0.04
HOXC13-201ENST00000243056 PAPPA-AS1Q5QFB9 102 aa14.82□□□□□ -0.04
HOXC13-201ENST00000243056 H3BUX3 64 aa14.82□□□□□ -0.04
HOXC13-201ENST00000243056 ATP5G1P05496 136 aa14.82□□□□□ -0.04
HOXC13-201ENST00000243056 DEFB104AQ8WTQ1 72 aa14.82□□□□□ -0.04
HOXC13-201ENST00000243056 SETD2Q9BYW2 2564 aaPredicted RBP14.81□□□□□ -0.04
HOXC13-201ENST00000243056 IGHV4-4A0A075B6R2 117 aa14.81□□□□□ -0.04
HOXC13-201ENST00000243056 DEFB112Q30KQ8 113 aa14.81□□□□□ -0.04
HOXC13-201ENST00000243056 Q8N9W7 124 aa14.81□□□□□ -0.04
HOXC13-201ENST00000243056 DUX5Q96PT3 197 aa14.81□□□□□ -0.04
HOXC13-201ENST00000243056 HIVEP1P15822 2718 aa14.8□□□□□ -0.04
HOXC13-201ENST00000243056 NPBQ8NG41 125 aa14.8□□□□□ -0.04
HOXC13-201ENST00000243056 LINC00643Q86TS7 51 aa14.8□□□□□ -0.04
HOXC13-201ENST00000243056 TP53TG1Q9Y2A0 90 aa14.8□□□□□ -0.04
HOXC13-201ENST00000243056 Q6ZSV7 163 aa14.79□□□□□ -0.04
HOXC13-201ENST00000243056 DSCR8Q96T75 97 aa14.79□□□□□ -0.04
HOXC13-201ENST00000243056 IGIPA6NJ69 53 aa14.78□□□□□ -0.04
HOXC13-201ENST00000243056 LST1O00453 97 aa14.78□□□□□ -0.04
HOXC13-201ENST00000243056 SPANXDQ9BXN6 97 aa14.78□□□□□ -0.04
HOXC13-201ENST00000243056 ANK3Q12955 4377 aaKnown RBP14.78□□□□□ -0.04
HOXC13-201ENST00000243056 RNF182Q8N6D2 247 aa14.78□□□□□ -0.04
HOXC13-201ENST00000243056 SPANXCQ9NY87 97 aa14.78□□□□□ -0.04
HOXC13-201ENST00000243056 IGHV4-59P01825 116 aa14.77□□□□□ -0.04
HOXC13-201ENST00000243056 TRACP01848 142 aa14.77□□□□□ -0.04
HOXC13-201ENST00000243056 ACYP1P07311 99 aa14.77□□□□□ -0.04
HOXC13-201ENST00000243056 C5orf38Q86SI9 138 aa14.77□□□□□ -0.04
HOXC13-201ENST00000243056 RNF5Q99942 180 aa14.77□□□□□ -0.05
HOXC13-201ENST00000243056 IGHV3-64A0A075B6Q5 118 aa14.76□□□□□ -0.05
HOXC13-201ENST00000243056 IGHV7-81A0A0B4J1V7 117 aa14.76□□□□□ -0.05
HOXC13-201ENST00000243056 RPL39P62891 51 aaKnown RBP14.76□□□□□ -0.05
HOXC13-201ENST00000243056 MRAPQ8TCY5 172 aa14.76□□□□□ -0.05
HOXC13-201ENST00000243056 BLCAPP62952 87 aa14.75□□□□□ -0.05
HOXC13-201ENST00000243056 KRTAP1-1Q07627 177 aa14.75□□□□□ -0.05
HOXC13-201ENST00000243056 TRAV8-3A0A0A6YYJ7 113 aa14.75□□□□□ -0.05
HOXC13-201ENST00000243056 FAM19A4Q96LR4 140 aa14.75□□□□□ -0.05
HOXC13-201ENST00000243056 G3V318 75 aa14.74□□□□□ -0.05
HOXC13-201ENST00000243056 LEPROTO15243 131 aa14.74□□□□□ -0.05
HOXC13-201ENST00000243056 HIST1H4AP62805 103 aaKnown RBP14.74□□□□□ -0.05
HOXC13-201ENST00000243056 TMEM258P61165 79 aa14.74□□□□□ -0.05
HOXC13-201ENST00000243056 AGPAT4-IT1Q9H0P7 198 aa14.74□□□□□ -0.05
HOXC13-201ENST00000243056 M0R381 172 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 MGPP08493 103 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 ZNF876PQ49A33 203 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 ZNF580Q9UK33 172 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 IGHV3OR16-8A0A075B7F1 116 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 F8W735 103 aaPredicted RBP14.73□□□□□ -0.05
HOXC13-201ENST00000243056 ECSCRQ19T08 205 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 SDIM1Q6ZPB5 146 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 C5orf56Q8N8D9 126 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 DCANP1Q8TF63 244 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 HIVEP2P31629 2446 aa14.73□□□□□ -0.05
HOXC13-201ENST00000243056 J3QLI3 93 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 ATP6V0E1O15342 81 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 CXCL5P42830 114 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 NSUN5P1Q3KNT7 163 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 TRBV7-1A0A0A6YYK4 115 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 I3L3M4 83 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 COX6CP09669 75 aa14.72□□□□□ -0.05
HOXC13-201ENST00000243056 A0A0J9YXY3 114 aa14.71□□□□□ -0.05
HOXC13-201ENST00000243056 RNF152Q8N8N0 203 aa14.71□□□□□ -0.05
HOXC13-201ENST00000243056 FSHBP01225 129 aa14.71□□□□□ -0.06
HOXC13-201ENST00000243056 IGHV3-23P01764 117 aa14.71□□□□□ -0.06
HOXC13-201ENST00000243056 GPHB5Q86YW7 130 aa14.71□□□□□ -0.06
HOXC13-201ENST00000243056 DPH3P1Q9H4G8 78 aa14.71□□□□□ -0.06
HOXC13-201ENST00000243056 RHOHQ15669 191 aa14.7□□□□□ -0.06
HOXC13-201ENST00000243056 LITAFQ99732 161 aa14.7□□□□□ -0.06
HOXC13-201ENST00000243056 NIPBLQ6KC79 2804 aaeCLIP14.7□□□□□ -0.06
HOXC13-201ENST00000243056 ATOX1O00244 68 aa14.7□□□□□ -0.06
HOXC13-201ENST00000243056 A6NDX4 124 aa14.69□□□□□ -0.06
HOXC13-201ENST00000243056 ADARB2-AS1A8MUL3 147 aa14.69□□□□□ -0.06
HOXC13-201ENST00000243056 LINC00477Q96M19 166 aa14.69□□□□□ -0.06
HOXC13-201ENST00000243056 MOB4Q9Y3A3 225 aa14.68□□□□□ -0.06
HOXC13-201ENST00000243056 PRR9Q5T870 116 aa14.68□□□□□ -0.06
HOXC13-201ENST00000243056 TMEM141Q96I45 108 aa14.68□□□□□ -0.06
HOXC13-201ENST00000243056 UPK3BQ9BT76 320 aa14.68□□□□□ -0.06
HOXC13-201ENST00000243056 JPT2Q9H910 190 aa14.68□□□□□ -0.06
HOXC13-201ENST00000243056 PYGO1Q9Y3Y4 419 aa14.68□□□□□ -0.06
HOXC13-201ENST00000243056 TIMM17AQ99595 171 aa14.67□□□□□ -0.06
HOXC13-201ENST00000243056 SDHAF1A6NFY7 115 aa14.66□□□□□ -0.06
HOXC13-201ENST00000243056 FANCD2OSQ96PS1 177 aa14.66□□□□□ -0.06
HOXC13-201ENST00000243056 OPRPNQ99935 248 aaPredicted RBP14.66□□□□□ -0.06
HOXC13-201ENST00000243056 A0A0J9YX75 114 aa14.66□□□□□ -0.06
HOXC13-201ENST00000243056 PRSS2P07478 247 aa14.66□□□□□ -0.06
HOXC13-201ENST00000243056 TEP1Q99973 2627 aaKnown RBP14.66□□□□□ -0.06
HOXC13-201ENST00000243056 TIMM21Q9BVV7 248 aa14.66□□□□□ -0.06
HOXC13-201ENST00000243056 NPC2P61916 151 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms