RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 DEFB135Q30KP9 77 aa10.49□□□□□ -0.73
TARDBP-201ENST00000240185 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
TARDBP-201ENST00000240185 Q8N9L7 120 aa10.49□□□□□ -0.73
TARDBP-201ENST00000240185 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 LINC00269Q8N2A0 174 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 UNQ9165/PRO28630Q6UXU0 137 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 IGHV4-61A0A0C4DH41 118 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 INSL3P51460 131 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
TARDBP-201ENST00000240185 IGKV1D-37A0A075B6S9 117 aa10.47□□□□□ -0.73
TARDBP-201ENST00000240185 PLA2G5P39877 138 aa10.47□□□□□ -0.73
TARDBP-201ENST00000240185 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
TARDBP-201ENST00000240185 REG3AQ06141 175 aa10.47□□□□□ -0.73
TARDBP-201ENST00000240185 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
TARDBP-201ENST00000240185 ODF3L1Q8IXM7 274 aa10.47□□□□□ -0.73
TARDBP-201ENST00000240185 FAM19A1Q7Z5A9 133 aa10.46□□□□□ -0.73
TARDBP-201ENST00000240185 LY6G6EA0A0G2JKS1 128 aa10.46□□□□□ -0.74
TARDBP-201ENST00000240185 IGLV1-47P01700 117 aa10.46□□□□□ -0.74
TARDBP-201ENST00000240185 MBD6Q96DN6 1003 aa10.46□□□□□ -0.74
TARDBP-201ENST00000240185 U3KQA8 63 aa10.46□□□□□ -0.74
TARDBP-201ENST00000240185 SERP1Q9Y6X1 66 aa10.46□□□□□ -0.74
TARDBP-201ENST00000240185 TCF20Q9UGU0 1960 aaKnown RBP10.46□□□□□ -0.74
TARDBP-201ENST00000240185 GRNP28799 593 aaKnown RBP10.45□□□□□ -0.74
TARDBP-201ENST00000240185 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
TARDBP-201ENST00000240185 MGAMO43451 1857 aa10.45□□□□□ -0.74
TARDBP-201ENST00000240185 LST1O00453 97 aa10.45□□□□□ -0.74
TARDBP-201ENST00000240185 CHCHD10Q8WYQ3 142 aaPredicted RBP10.45□□□□□ -0.74
TARDBP-201ENST00000240185 FREM1Q5H8C1 2179 aa10.44□□□□□ -0.74
TARDBP-201ENST00000240185 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
TARDBP-201ENST00000240185 MRPS36P82909 103 aaKnown RBP10.44□□□□□ -0.74
TARDBP-201ENST00000240185 Q6Q795 121 aa10.44□□□□□ -0.74
TARDBP-201ENST00000240185 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
TARDBP-201ENST00000240185 Q6ZTI0 123 aa10.44□□□□□ -0.74
TARDBP-201ENST00000240185 FAM208BQ5VWN6 2430 aa10.44□□□□□ -0.74
TARDBP-201ENST00000240185 MIFP14174 115 aa10.43□□□□□ -0.74
TARDBP-201ENST00000240185 RNF138Q8WVD3 245 aa10.43□□□□□ -0.74
TARDBP-201ENST00000240185 Q6ZQY7 126 aa10.43□□□□□ -0.74
TARDBP-201ENST00000240185 RETNQ9HD89 108 aa10.43□□□□□ -0.74
TARDBP-201ENST00000240185 DCANP1Q8TF63 244 aa10.43□□□□□ -0.74
TARDBP-201ENST00000240185 PLXNB1O43157 2135 aa10.42□□□□□ -0.74
TARDBP-201ENST00000240185 DENND4AQ7Z401 1863 aa10.42□□□□□ -0.74
TARDBP-201ENST00000240185 LRCOL1A6NCL2 159 aa10.42□□□□□ -0.74
TARDBP-201ENST00000240185 C2CD3Q4AC94 2353 aa10.42□□□□□ -0.74
TARDBP-201ENST00000240185 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
TARDBP-201ENST00000240185 DOPEY1Q5JWR5 2465 aa10.41□□□□□ -0.74
TARDBP-201ENST00000240185 YPEL4Q96NS1 127 aa10.41□□□□□ -0.74
TARDBP-201ENST00000240185 P0C879 139 aa10.41□□□□□ -0.74
TARDBP-201ENST00000240185 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
TARDBP-201ENST00000240185 Q8N7P7 452 aa10.4□□□□□ -0.74
TARDBP-201ENST00000240185 Q6JHZ5 121 aa10.4□□□□□ -0.74
TARDBP-201ENST00000240185 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
TARDBP-201ENST00000240185 MAP6D1Q9H9H5 199 aa10.4□□□□□ -0.74
TARDBP-201ENST00000240185 A8MZ25 164 aa10.4□□□□□ -0.75
TARDBP-201ENST00000240185 H7C423 109 aa10.39□□□□□ -0.75
TARDBP-201ENST00000240185 A0A087WZ39 114 aa10.39□□□□□ -0.75
TARDBP-201ENST00000240185 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
TARDBP-201ENST00000240185 SONP18583 2426 aaKnown RBP10.39□□□□□ -0.75
TARDBP-201ENST00000240185 TMEM89A2RUT3 159 aa10.39□□□□□ -0.75
TARDBP-201ENST00000240185 FAM30AQ9NZY2 134 aa10.39□□□□□ -0.75
TARDBP-201ENST00000240185 EBI3Q14213 229 aa10.38□□□□□ -0.75
TARDBP-201ENST00000240185 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
TARDBP-201ENST00000240185 U3KQK5 164 aa10.38□□□□□ -0.75
TARDBP-201ENST00000240185 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
TARDBP-201ENST00000240185 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
TARDBP-201ENST00000240185 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
TARDBP-201ENST00000240185 TSC2P49815 1807 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 C22orf34Q6ZV56 151 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 HELZP42694 1942 aaKnown RBP10.37□□□□□ -0.75
TARDBP-201ENST00000240185 M0QY20 66 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 C4orf3Q8WVX3 66 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 MYCNOSP40205 109 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 FAM19A5Q7Z5A7 132 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-201ENST00000240185 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 IGF1P05019 195 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 ODF3Q96PU9 254 aa10.37□□□□□ -0.75
TARDBP-201ENST00000240185 TRAV7A0A075B6U4 112 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 THSD7BQ9C0I4 1608 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 ZFP36P26651 326 aaKnown RBP10.36□□□□□ -0.75
TARDBP-201ENST00000240185 IGHV4-30-4P0DP06 118 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 CRIP1P50238 77 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 NCKAP5O14513 1909 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
TARDBP-201ENST00000240185 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
TARDBP-201ENST00000240185 ZNF295-AS1Q8N0V1 137 aa10.35□□□□□ -0.75
TARDBP-201ENST00000240185 SMIM11BQ8TCY0 68 aa10.35□□□□□ -0.75
TARDBP-201ENST00000240185 Q6ZS46 218 aa10.35□□□□□ -0.75
TARDBP-201ENST00000240185 PRR14LQ5THK1 2151 aa10.35□□□□□ -0.75
TARDBP-201ENST00000240185 NOTCH2Q04721 2471 aa10.34□□□□□ -0.75
TARDBP-201ENST00000240185 Q8N976 141 aa10.34□□□□□ -0.75
TARDBP-201ENST00000240185 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
TARDBP-201ENST00000240185 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
TARDBP-201ENST00000240185 PYGO1Q9Y3Y4 419 aa10.34□□□□□ -0.75
TARDBP-201ENST00000240185 PLXNA3P51805 1871 aa10.34□□□□□ -0.75
TARDBP-201ENST00000240185 SRCAPQ6ZRS2 3230 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms