RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 TMEM126AQ9H061 195 aa5.94□□□□□ -1.46
NANOG-201ENST00000229307 RS1O15537 224 aa5.94□□□□□ -1.46
NANOG-201ENST00000229307 LAMTOR3Q9UHA4 124 aa5.94□□□□□ -1.46
NANOG-201ENST00000229307 FRMD6-AS1P0C7T7 363 aa5.94□□□□□ -1.46
NANOG-201ENST00000229307 RNASE13Q5GAN3 156 aaKnown RBP5.94□□□□□ -1.46
NANOG-201ENST00000229307 TRAV13-2A0A0B4J235 113 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 C19orf71A6NCJ1 209 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 NOTCH3Q9UM47 2321 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 CRYBA4P53673 196 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 DCANP1Q8TF63 244 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 USP9YO00507 2555 aaPredicted RBP5.93□□□□□ -1.46
NANOG-201ENST00000229307 SIVA1O15304 175 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 HIST2H2BDQ6DRA6 164 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 MSRB1Q9NZV6 116 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 PRB2P02812 416 aaPredicted RBP5.93□□□□□ -1.46
NANOG-201ENST00000229307 BOD1L2Q8IYS8 172 aa5.93□□□□□ -1.46
NANOG-201ENST00000229307 A0A0J9YWU9 116 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 J3QQQ9 107 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 TIMM17AQ99595 171 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 MRPL35Q9NZE8 188 aaKnown RBP5.92□□□□□ -1.46
NANOG-201ENST00000229307 TP53TG3Q9ULZ0 132 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 PCSK5Q92824 1860 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 CFAP54Q96N23 3096 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 MYO9AB2RTY4 2548 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 LY6G6CO95867 125 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 ZFAND6Q6FIF0 208 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 COX7B2Q8TF08 81 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 REV3LO60673 3130 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 ZFAND2AQ8N6M9 145 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 SPAG11BQ08648 103 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 ZNF479Q96JC4 524 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 SPCS1Q9Y6A9 102 aa5.92□□□□□ -1.46
NANOG-201ENST00000229307 GATA1P15976 413 aaPredicted RBP5.91□□□□□ -1.46
NANOG-201ENST00000229307 PIK3CD-AS1Q5SR53 167 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 AKAP13Q12802 2813 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 SONP18583 2426 aaKnown RBP5.91□□□□□ -1.46
NANOG-201ENST00000229307 KPRPQ5T749 579 aaPredicted RBP5.91□□□□□ -1.46
NANOG-201ENST00000229307 GDF5OSQ5U4N7 250 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 EYSQ5T1H1 3165 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 WFDC10AQ9H1F0 79 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 SS18L2Q9UHA2 77 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 C2CD3Q4AC94 2353 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 KRTAP24-1Q3LI83 254 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 ODF3L2Q3SX64 289 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 CFAP126Q5VTH2 177 aa5.91□□□□□ -1.46
NANOG-201ENST00000229307 ETDCA0A1B0GVM5 59 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 GAGE12HA6NDE8 117 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 ZNF80P51504 273 aaPredicted RBP5.9□□□□□ -1.46
NANOG-201ENST00000229307 REG3AQ06141 175 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 GAGE2BQ13066 116 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 A0A1B0GWB2 263 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 KLLNB2CW77 178 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 TAL2Q16559 108 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 Q9H8V8 135 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 SCRT2Q9NQ03 307 aa5.9□□□□□ -1.46
NANOG-201ENST00000229307 C20orf203Q8NBC4 194 aa5.9□□□□□ -1.47
NANOG-201ENST00000229307 TOMM6Q96B49 74 aa5.9□□□□□ -1.47
NANOG-201ENST00000229307 IGLC6P0CF74 106 aa5.9□□□□□ -1.47
NANOG-201ENST00000229307 GAGE2EQ4V326 116 aa5.9□□□□□ -1.47
NANOG-201ENST00000229307 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.47
NANOG-201ENST00000229307 MRGPRG-AS1Q2M3A8 158 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 KRTAP21-3Q3LHN1 58 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 H3BUT2 72 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 LELP1Q5T871 98 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 LINC01545Q5VT33 79 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 F8P00451 2351 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
NANOG-201ENST00000229307 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
NANOG-201ENST00000229307 MIAQ16674 131 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 TDRG1Q3Y452 100 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 PLA2G2EQ9NZK7 142 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 TRBV6-8A0A0A6YYG3 113 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 MLST8Q9BVC4 326 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 FSHBP01225 129 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 IFITM1P13164 125 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 UBE2AP49459 152 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 IGHV1-58A0A0C4DH39 117 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 LINC00269Q8N2A0 174 aa5.88□□□□□ -1.47
NANOG-201ENST00000229307 NEXN-AS1Q8NBZ9 246 aa5.87□□□□□ -1.47
NANOG-201ENST00000229307 SAMD5Q5TGI4 173 aa5.87□□□□□ -1.47
NANOG-201ENST00000229307 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
NANOG-201ENST00000229307 A0A0J9YXV3 536 aa5.87□□□□□ -1.47
NANOG-201ENST00000229307 IGLC3P0DOY3 106 aa5.86□□□□□ -1.47
NANOG-201ENST00000229307 MPV17L2Q567V2 206 aa5.86□□□□□ -1.47
NANOG-201ENST00000229307 CHCHD10Q8WYQ3 142 aaPredicted RBP5.86□□□□□ -1.47
NANOG-201ENST00000229307 ABCA2Q9BZC7 2435 aa5.86□□□□□ -1.47
NANOG-201ENST00000229307 C7orf33Q8WU49 177 aa5.86□□□□□ -1.47
NANOG-201ENST00000229307 G3V4G9 280 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
NANOG-201ENST00000229307 C4orf48Q5BLP8 95 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 C9orf85Q96MD7 179 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 H3BQ85 93 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 BVES-AS1Q5T3Y7 98 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 UFSP1Q6NVU6 142 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 CHCHD7Q9BUK0 85 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 CYSRT1A8MQ03 144 aa5.85□□□□□ -1.47
NANOG-201ENST00000229307 IGLV2-8P01709 118 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms