RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 B5MCH6 92 aa11.13□□□□□ -0.63
EFNB1-201ENST00000204961 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
EFNB1-201ENST00000204961 M0QY20 66 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 NDUFA7O95182 113 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 TCL1BO95988 128 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 PSMB8P28062 276 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 CFAP126Q5VTH2 177 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 DYNLRB2Q8TF09 96 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 TRAV12-1A0A0B4J245 112 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 Q6ZUT4 128 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 PRORYQ9H606 182 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 TAL2Q16559 108 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 MUSTN1Q8IVN3 82 aa11.12□□□□□ -0.63
EFNB1-201ENST00000204961 A6NJY4 79 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 ANAPC13Q9BS18 74 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 C9JAW5 83 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 TRBV20-1A0A075B6N2 111 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 CFC1BP0CG36 223 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 CFC1P0CG37 223 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
EFNB1-201ENST00000204961 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
EFNB1-201ENST00000204961 PLA2G2AP14555 144 aa11.1□□□□□ -0.63
EFNB1-201ENST00000204961 ANKRD29Q8N6D5 301 aa11.09□□□□□ -0.63
EFNB1-201ENST00000204961 ATRQ13535 2644 aa11.09□□□□□ -0.63
EFNB1-201ENST00000204961 K7EQG2 157 aa11.09□□□□□ -0.63
EFNB1-201ENST00000204961 NDUFA11Q86Y39 141 aa11.09□□□□□ -0.63
EFNB1-201ENST00000204961 A8MWV9 139 aa11.09□□□□□ -0.63
EFNB1-201ENST00000204961 ELANEP08246 267 aa11.08□□□□□ -0.64
EFNB1-201ENST00000204961 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
EFNB1-201ENST00000204961 TRAV13-1A0A0B4J241 112 aa11.08□□□□□ -0.64
EFNB1-201ENST00000204961 SHISA2Q6UWI4 295 aa11.08□□□□□ -0.64
EFNB1-201ENST00000204961 LINC01356Q8N9X3 169 aa11.07□□□□□ -0.64
EFNB1-201ENST00000204961 FAM19A4Q96LR4 140 aa11.07□□□□□ -0.64
EFNB1-201ENST00000204961 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 I3L3M4 83 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 COX6B1P14854 86 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 PPDPFLQ8WWR9 84 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 BBC3Q96PG8 261 aaPredicted RBP11.06□□□□□ -0.64
EFNB1-201ENST00000204961 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
EFNB1-201ENST00000204961 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
EFNB1-201ENST00000204961 PPP1R17O96001 155 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
EFNB1-201ENST00000204961 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
EFNB1-201ENST00000204961 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 C20orf203Q8NBC4 194 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 Q96MF0 132 aa11.06□□□□□ -0.64
EFNB1-201ENST00000204961 TEN1Q86WV5 123 aa11.05□□□□□ -0.64
EFNB1-201ENST00000204961 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
EFNB1-201ENST00000204961 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
EFNB1-201ENST00000204961 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
EFNB1-201ENST00000204961 IGHV3-30P01768 117 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 IGHV3-30-5P0DP03 117 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 C10orf126Q8N4M7 172 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 PRO1854Q9UHT4 67 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 VWFP04275 2813 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 HERV-K104P63124 156 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 RHODO00212 210 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 VPREB3Q9UKI3 123 aa11.04□□□□□ -0.64
EFNB1-201ENST00000204961 TRBV27A0A0K0K1C4 114 aa11.03□□□□□ -0.64
EFNB1-201ENST00000204961 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
EFNB1-201ENST00000204961 ADAMTSL4-AS1Q5T5F5 129 aa11.03□□□□□ -0.64
EFNB1-201ENST00000204961 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
EFNB1-201ENST00000204961 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
EFNB1-201ENST00000204961 NTN5Q8WTR8 489 aaPredicted RBP11.02□□□□□ -0.64
EFNB1-201ENST00000204961 CLEC2BQ92478 149 aa11.02□□□□□ -0.64
EFNB1-201ENST00000204961 C9orf85Q96MD7 179 aa11.02□□□□□ -0.64
EFNB1-201ENST00000204961 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.64
EFNB1-201ENST00000204961 SLC25A20O43772 301 aa11.02□□□□□ -0.65
EFNB1-201ENST00000204961 UBE2D1P51668 147 aa11.02□□□□□ -0.65
EFNB1-201ENST00000204961 C11orf68Q9H3H3 251 aaKnown RBP11.02□□□□□ -0.65
EFNB1-201ENST00000204961 GAGE12JA6NER3 117 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 LGALS9O00182 355 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 GAGE4Q13068 117 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 GAGE5Q13069 117 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 SLC25A29Q8N8R3 303 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 ZNF702PQ9H963 129 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 TOMM7Q9P0U1 55 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 H3BUA1 57 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 K7EMT4 169 aa11.01□□□□□ -0.65
EFNB1-201ENST00000204961 LYRM7Q5U5X0 104 aa11□□□□□ -0.65
EFNB1-201ENST00000204961 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
EFNB1-201ENST00000204961 H3BMM0 161 aa11□□□□□ -0.65
EFNB1-201ENST00000204961 CRLF1O75462 422 aa11□□□□□ -0.65
EFNB1-201ENST00000204961 TIMM17AQ99595 171 aa11□□□□□ -0.65
EFNB1-201ENST00000204961 TRGV11A0A075B6L2 103 aa10.99□□□□□ -0.65
EFNB1-201ENST00000204961 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
EFNB1-201ENST00000204961 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
EFNB1-201ENST00000204961 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
EFNB1-201ENST00000204961 SNCGO76070 127 aa10.99□□□□□ -0.65
EFNB1-201ENST00000204961 UBE2D3P61077 147 aa10.99□□□□□ -0.65
EFNB1-201ENST00000204961 UBE2D2P62837 147 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms