RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 UBE2D1P51668 147 aa8.36□□□□□ -1.07
GPATCH1-201ENST00000170564 NPC2P61916 151 aa8.36□□□□□ -1.07
GPATCH1-201ENST00000170564 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
GPATCH1-201ENST00000170564 A4D1N5 150 aa8.36□□□□□ -1.07
GPATCH1-201ENST00000170564 C11orf44Q8N8P7 122 aa8.36□□□□□ -1.07
GPATCH1-201ENST00000170564 WNK1Q9H4A3 2382 aa8.36□□□□□ -1.07
GPATCH1-201ENST00000170564 FLNBO75369 2602 aaKnown RBP8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 C3orf56Q8N813 242 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 IGKV3-20P01619 116 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 CD7P09564 240 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 TRAV21A0A0B4J279 112 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 TSPEAR-AS2P59090 65 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 C4orf3Q8WVX3 66 aa8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 FN1P02751 2386 aaKnown RBP8.35□□□□□ -1.07
GPATCH1-201ENST00000170564 UBE2D3P61077 147 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 UBE2D2P62837 147 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 TRAV4A0A0B4J268 109 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 J3QQQ9 107 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 CD28P10747 220 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 PMVKQ15126 192 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 LINC01006Q8NI28 216 aa8.34□□□□□ -1.07
GPATCH1-201ENST00000170564 K7EQG2 157 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 LY6G6DO95868 133 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 APRG1Q8IVJ8 170 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 CRLF1O75462 422 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 VCX2Q9H322 139 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 CCDC179H3BU77 68 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 OVOL1O14753 267 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 SMIM20Q8N5G0 67 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 LINC00477Q96M19 166 aa8.33□□□□□ -1.08
GPATCH1-201ENST00000170564 MUC4Q99102 2169 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 TRAV8-4A0A0B4J246 113 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 CRYGDP07320 174 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 JMJD1CQ15652 2540 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 LINC01619G3V211 115 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 ZNF56Q15929 161 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
GPATCH1-201ENST00000170564 KHDC1LQ5JSQ8 128 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 SDHAF1A6NFY7 115 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 HTN1P15515 57 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 A0A1W2PRX2 142 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 KLLNB2CW77 178 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 HILS1P60008 231 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 Q8N1Y9 231 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 NOTCH3Q9UM47 2321 aa8.31□□□□□ -1.08
GPATCH1-201ENST00000170564 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 GAGE12JA6NER3 117 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 GAGE7O76087 117 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 TSHBP01222 138 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 GAGE12FP0CL80 117 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 GAGE12GP0CL81 117 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 GAGE12IP0CL82 117 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 GAGE4Q13068 117 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 CITED2Q99967 270 aaPredicted RBP8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 IFITM1P13164 125 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 NDUFV3P56181 108 aaKnown RBP8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 SPXQ9BT56 116 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 C2CD3Q4AC94 2353 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 A0A0J9YX75 114 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 TMEM61Q8N0U2 210 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
GPATCH1-201ENST00000170564 VCYO14598 125 aa8.29□□□□□ -1.08
GPATCH1-201ENST00000170564 SUMO4Q6EEV6 95 aa8.29□□□□□ -1.08
GPATCH1-201ENST00000170564 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
GPATCH1-201ENST00000170564 KRTAP10-3P60369 221 aa8.29□□□□□ -1.08
GPATCH1-201ENST00000170564 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
GPATCH1-201ENST00000170564 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
GPATCH1-201ENST00000170564 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 PPP1R17O96001 155 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 HERV-K104P63124 156 aa8.28□□□□□ -1.08
GPATCH1-201ENST00000170564 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
GPATCH1-201ENST00000170564 INAFM1C9JVW0 142 aa8.27□□□□□ -1.09
GPATCH1-201ENST00000170564 ID1P41134 155 aa8.27□□□□□ -1.09
GPATCH1-201ENST00000170564 RBMY1A1P0DJD3 496 aaKnown RBP8.27□□□□□ -1.09
GPATCH1-201ENST00000170564 RBMY1CP0DJD4 496 aa8.27□□□□□ -1.09
GPATCH1-201ENST00000170564 RBMY1FQ15415 496 aaKnown RBP8.27□□□□□ -1.09
GPATCH1-201ENST00000170564 TRBV7-9A0A0J9YWB2 115 aa8.26□□□□□ -1.09
GPATCH1-201ENST00000170564 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
GPATCH1-201ENST00000170564 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
GPATCH1-201ENST00000170564 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
GPATCH1-201ENST00000170564 H3BMM0 161 aa8.26□□□□□ -1.09
GPATCH1-201ENST00000170564 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms