RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 RHOHQ15669 191 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 SETD2Q9BYW2 2564 aaPredicted RBP14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 POM121L12Q8N7R1 296 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 WNK1Q9H4A3 2382 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 TRBV7-9A0A0J9YWB2 115 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 NSUN5P1Q3KNT7 163 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 FBXL19-AS1Q494R0 122 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 TNFRSF18Q9Y5U5 241 aa14.82□□□□□ -0.04
PPP1R3F-201ENST00000055335 ABCA2Q9BZC7 2435 aa14.81□□□□□ -0.04
PPP1R3F-201ENST00000055335 TRBV30A0A0K0K1B3 111 aa14.81□□□□□ -0.04
PPP1R3F-201ENST00000055335 TRBV6-5A0A0K0K1A5 114 aa14.81□□□□□ -0.04
PPP1R3F-201ENST00000055335 USMG5Q96IX5 58 aa14.81□□□□□ -0.04
PPP1R3F-201ENST00000055335 K7ENP7 123 aa14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 SHISA2Q6UWI4 295 aa14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 APRG1Q8IVJ8 170 aa14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 DCANP1Q8TF63 244 aa14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 CENPEQ02224 2701 aa14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 USP9XQ93008 2570 aaPredicted RBP14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 TRGV11A0A075B6L2 103 aa14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 SNRPD3P62318 126 aaKnown RBP14.8□□□□□ -0.04
PPP1R3F-201ENST00000055335 CELSR2Q9HCU4 2923 aa14.79□□□□□ -0.04
PPP1R3F-201ENST00000055335 POLQO75417 2590 aa14.78□□□□□ -0.04
PPP1R3F-201ENST00000055335 C9orf85Q96MD7 179 aa14.78□□□□□ -0.04
PPP1R3F-201ENST00000055335 IGHV1-58A0A0C4DH39 117 aa14.77□□□□□ -0.05
PPP1R3F-201ENST00000055335 SYNJ2BPP57105 145 aa14.77□□□□□ -0.05
PPP1R3F-201ENST00000055335 KLK9Q2XQG4 91 aa14.77□□□□□ -0.05
PPP1R3F-201ENST00000055335 DGAT2L7PQ6IED9 249 aa14.77□□□□□ -0.05
PPP1R3F-201ENST00000055335 LITAFQ99732 161 aa14.76□□□□□ -0.05
PPP1R3F-201ENST00000055335 PTPN13Q12923 2485 aa14.75□□□□□ -0.05
PPP1R3F-201ENST00000055335 TLN2Q9Y4G6 2542 aa14.75□□□□□ -0.05
PPP1R3F-201ENST00000055335 A0A0J9YX75 114 aa14.75□□□□□ -0.05
PPP1R3F-201ENST00000055335 C19orf54Q5BKX5 351 aa14.75□□□□□ -0.05
PPP1R3F-201ENST00000055335 IGHG2P01859 326 aa14.74□□□□□ -0.05
PPP1R3F-201ENST00000055335 MIAQ16674 131 aa14.74□□□□□ -0.05
PPP1R3F-201ENST00000055335 FAM236AA0A1B0GUQ0 79 aa14.74□□□□□ -0.05
PPP1R3F-201ENST00000055335 FAM236BA0A1B0GV22 79 aa14.74□□□□□ -0.05
PPP1R3F-201ENST00000055335 CDKN2A-AS1Q9UH64 79 aa14.73□□□□□ -0.05
PPP1R3F-201ENST00000055335 IGHV4-61A0A0C4DH41 118 aa14.73□□□□□ -0.05
PPP1R3F-201ENST00000055335 VSIG2Q96IQ7 327 aa14.73□□□□□ -0.05
PPP1R3F-201ENST00000055335 TMEM61Q8N0U2 210 aa14.72□□□□□ -0.05
PPP1R3F-201ENST00000055335 ZANQ9Y493 2812 aa14.71□□□□□ -0.05
PPP1R3F-201ENST00000055335 H3BT86 120 aa14.71□□□□□ -0.05
PPP1R3F-201ENST00000055335 LST1O00453 97 aa14.7□□□□□ -0.06
PPP1R3F-201ENST00000055335 RS1O15537 224 aa14.7□□□□□ -0.06
PPP1R3F-201ENST00000055335 MRPS36P82909 103 aaKnown RBP14.7□□□□□ -0.06
PPP1R3F-201ENST00000055335 Q6ZSN1 163 aa14.7□□□□□ -0.06
PPP1R3F-201ENST00000055335 LINC00467Q9BRT7 94 aa14.7□□□□□ -0.06
PPP1R3F-201ENST00000055335 M0QXV9 152 aa14.69□□□□□ -0.06
PPP1R3F-201ENST00000055335 Q9H8V8 135 aa14.69□□□□□ -0.06
PPP1R3F-201ENST00000055335 IGHV3OR16-12A0A075B7B8 117 aa14.68□□□□□ -0.06
PPP1R3F-201ENST00000055335 Q6Q795 121 aa14.68□□□□□ -0.06
PPP1R3F-201ENST00000055335 JMJD1CQ15652 2540 aa14.68□□□□□ -0.06
PPP1R3F-201ENST00000055335 TRAV13-1A0A0B4J241 112 aa14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 RBMY1A1P0DJD3 496 aaKnown RBP14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 RBMY1CP0DJD4 496 aa14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 RBMY1FQ15415 496 aaKnown RBP14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 FAM104AQ969W3 186 aa14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 NDUFA7O95182 113 aa14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 CIRBPQ14011 172 aaKnown RBP14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 TMEM101Q96IK0 257 aa14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 YAE1D1Q9NRH1 226 aa14.67□□□□□ -0.06
PPP1R3F-201ENST00000055335 DEFB131AP59861 70 aa14.66□□□□□ -0.06
PPP1R3F-201ENST00000055335 KLRB1Q12918 225 aa14.66□□□□□ -0.06
PPP1R3F-201ENST00000055335 HOXD3P31249 432 aaPredicted RBP14.66□□□□□ -0.06
PPP1R3F-201ENST00000055335 HIST2H2BDQ6DRA6 164 aa14.66□□□□□ -0.06
PPP1R3F-201ENST00000055335 SPANXDQ9BXN6 97 aa14.65□□□□□ -0.06
PPP1R3F-201ENST00000055335 SPANXCQ9NY87 97 aa14.65□□□□□ -0.06
PPP1R3F-201ENST00000055335 LY6DQ14210 128 aa14.65□□□□□ -0.06
PPP1R3F-201ENST00000055335 FAM208BQ5VWN6 2430 aa14.65□□□□□ -0.06
PPP1R3F-201ENST00000055335 ACACBO00763 2458 aa14.64□□□□□ -0.07
PPP1R3F-201ENST00000055335 C19orf84I3L1E1 186 aa14.64□□□□□ -0.07
PPP1R3F-201ENST00000055335 A6NDX4 124 aa14.64□□□□□ -0.07
PPP1R3F-201ENST00000055335 Q8N2B8 174 aa14.64□□□□□ -0.07
PPP1R3F-201ENST00000055335 UBE2D4Q9Y2X8 147 aa14.64□□□□□ -0.07
PPP1R3F-201ENST00000055335 K7EQG2 157 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 COX6A2Q02221 97 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 ITPR1Q14643 2758 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 CACNA1AO00555 2505 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 DEFB136Q30KP8 78 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 CITED2Q99967 270 aaPredicted RBP14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 IGLV1-40P01703 118 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 IGHV4-59P01825 116 aa14.63□□□□□ -0.07
PPP1R3F-201ENST00000055335 TINCRA0A1B0GVN0 87 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 LINC01587Q99440 93 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 Q9HAA7 133 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 SONP18583 2426 aaKnown RBP14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 IGKV3OR2-268A0A0C4DH90 116 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 H3BUA1 57 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 PYGO1Q9Y3Y4 419 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 K7EMT4 169 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 DAZ2Q13117 558 aaKnown RBP14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 DAZ4Q86SG3 579 aaKnown RBP14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 PRIMA1Q86XR5 153 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 CHCHD7Q9BUK0 85 aa14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 DAZ3Q9NR90 486 aaKnown RBP14.62□□□□□ -0.07
PPP1R3F-201ENST00000055335 C9orf153Q5TBE3 101 aa14.61□□□□□ -0.07
PPP1R3F-201ENST00000055335 GAGE2AQ6NT46 116 aa14.61□□□□□ -0.07
PPP1R3F-201ENST00000055335 IGHV3-53P01767 116 aa14.61□□□□□ -0.07
PPP1R3F-201ENST00000055335 LINC00308Q8TCZ7 52 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms