RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 IGKV2-29A2NJV5 120 aaPredicted RBP14.81□□□□□ -0.04
RCN1-201ENST00000054950 HOXD3P31249 432 aaPredicted RBP14.81□□□□□ -0.04
RCN1-201ENST00000054950 DEFB136Q30KP8 78 aa14.81□□□□□ -0.04
RCN1-201ENST00000054950 HIST2H2BDQ6DRA6 164 aa14.81□□□□□ -0.04
RCN1-201ENST00000054950 IGHV3-38A0A0C4DH36 116 aa14.8□□□□□ -0.04
RCN1-201ENST00000054950 C18orf65Q6ZTR6 163 aa14.8□□□□□ -0.04
RCN1-201ENST00000054950 TRGV11A0A075B6L2 103 aa14.8□□□□□ -0.04
RCN1-201ENST00000054950 LINC01620Q4KN68 170 aa14.8□□□□□ -0.04
RCN1-201ENST00000054950 GATA3P23771 443 aa14.8□□□□□ -0.04
RCN1-201ENST00000054950 RNF183Q96D59 192 aa14.8□□□□□ -0.04
RCN1-201ENST00000054950 TEX49A0A1B0GTD5 131 aa14.79□□□□□ -0.04
RCN1-201ENST00000054950 DEFB131AP59861 70 aa14.79□□□□□ -0.04
RCN1-201ENST00000054950 PKD1L2Q7Z442 2459 aa14.79□□□□□ -0.04
RCN1-201ENST00000054950 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.79□□□□□ -0.04
RCN1-201ENST00000054950 RBMY1BA6NDE4 496 aaKnown RBP14.79□□□□□ -0.04
RCN1-201ENST00000054950 RBMY1EA6NEQ0 496 aaKnown RBP14.79□□□□□ -0.04
RCN1-201ENST00000054950 RBMY1DP0C7P1 496 aaKnown RBP14.79□□□□□ -0.04
RCN1-201ENST00000054950 MRPS36P82909 103 aaKnown RBP14.79□□□□□ -0.04
RCN1-201ENST00000054950 CENPEQ02224 2701 aa14.78□□□□□ -0.04
RCN1-201ENST00000054950 B4DSR2 109 aa14.78□□□□□ -0.04
RCN1-201ENST00000054950 DAND5Q8N907 189 aa14.78□□□□□ -0.04
RCN1-201ENST00000054950 NDUFA12Q9UI09 145 aa14.78□□□□□ -0.04
RCN1-201ENST00000054950 TNFRSF18Q9Y5U5 241 aa14.78□□□□□ -0.04
RCN1-201ENST00000054950 ATXN8Q156A1 80 aa14.77□□□□□ -0.04
RCN1-201ENST00000054950 SLURP1P55000 103 aa14.77□□□□□ -0.05
RCN1-201ENST00000054950 DUX3Q96PT4 197 aa14.77□□□□□ -0.05
RCN1-201ENST00000054950 IGHV1-58A0A0C4DH39 117 aa14.76□□□□□ -0.05
RCN1-201ENST00000054950 CRLF1O75462 422 aa14.76□□□□□ -0.05
RCN1-201ENST00000054950 CHCHD7Q9BUK0 85 aa14.76□□□□□ -0.05
RCN1-201ENST00000054950 PYGO1Q9Y3Y4 419 aa14.76□□□□□ -0.05
RCN1-201ENST00000054950 LINC00467Q9BRT7 94 aa14.75□□□□□ -0.05
RCN1-201ENST00000054950 CLEC2BQ92478 149 aa14.75□□□□□ -0.05
RCN1-201ENST00000054950 UBE2D4Q9Y2X8 147 aa14.74□□□□□ -0.05
RCN1-201ENST00000054950 VSIG2Q96IQ7 327 aa14.74□□□□□ -0.05
RCN1-201ENST00000054950 ICOSQ9Y6W8 199 aa14.74□□□□□ -0.05
RCN1-201ENST00000054950 ANKRD17O75179 2603 aaKnown RBP14.73□□□□□ -0.05
RCN1-201ENST00000054950 FBN2P35556 2912 aa14.73□□□□□ -0.05
RCN1-201ENST00000054950 TRAV4A0A0B4J268 109 aa14.73□□□□□ -0.05
RCN1-201ENST00000054950 TRBV30A0A0K0K1B3 111 aa14.73□□□□□ -0.05
RCN1-201ENST00000054950 TMEM262E9PQX1 116 aa14.73□□□□□ -0.05
RCN1-201ENST00000054950 PRORYQ9H606 182 aa14.73□□□□□ -0.05
RCN1-201ENST00000054950 AKAP9Q99996 3911 aa14.73□□□□□ -0.05
RCN1-201ENST00000054950 DOPEY1Q5JWR5 2465 aa14.72□□□□□ -0.05
RCN1-201ENST00000054950 ZFAND6Q6FIF0 208 aa14.72□□□□□ -0.05
RCN1-201ENST00000054950 CITED1Q99966 193 aa14.72□□□□□ -0.05
RCN1-201ENST00000054950 ANAPC13Q9BS18 74 aa14.72□□□□□ -0.05
RCN1-201ENST00000054950 TEX29Q8N6K0 151 aa14.71□□□□□ -0.05
RCN1-201ENST00000054950 TRBV10-2A0A0K0K1G8 114 aa14.71□□□□□ -0.06
RCN1-201ENST00000054950 H3BMM0 161 aa14.71□□□□□ -0.06
RCN1-201ENST00000054950 MIAQ16674 131 aa14.71□□□□□ -0.06
RCN1-201ENST00000054950 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.71□□□□□ -0.06
RCN1-201ENST00000054950 CDKN2A-AS1Q9UH64 79 aa14.7□□□□□ -0.06
RCN1-201ENST00000054950 SPANXDQ9BXN6 97 aa14.7□□□□□ -0.06
RCN1-201ENST00000054950 SPANXCQ9NY87 97 aa14.7□□□□□ -0.06
RCN1-201ENST00000054950 A0A0U1RRA0 63 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 TINCRA0A1B0GVN0 87 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 M0QXV9 152 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 ZNF702PQ9H963 129 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 MYO9AB2RTY4 2548 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 H7C423 109 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 C2orf82Q6UX34 121 aa14.69□□□□□ -0.06
RCN1-201ENST00000054950 TMEM61Q8N0U2 210 aa14.68□□□□□ -0.06
RCN1-201ENST00000054950 MYO18BQ8IUG5 2567 aa14.68□□□□□ -0.06
RCN1-201ENST00000054950 RNF152Q8N8N0 203 aa14.68□□□□□ -0.06
RCN1-201ENST00000054950 EDA2RQ9HAV5 297 aa14.68□□□□□ -0.06
RCN1-201ENST00000054950 UBE2WQ96B02 151 aa14.67□□□□□ -0.06
RCN1-201ENST00000054950 ZNF625Q96I27 306 aaPredicted RBP14.67□□□□□ -0.06
RCN1-201ENST00000054950 RPL13AP40429 203 aaKnown RBP14.67□□□□□ -0.06
RCN1-201ENST00000054950 TRAV8-4A0A0B4J246 113 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 TMEM89A2RUT3 159 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 SNCGO76070 127 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 COX6A2Q02221 97 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 UBE2E2Q96LR5 201 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 LINC01587Q99440 93 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 NDUFA7O95182 113 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 NHLRC4P0CG21 123 aaPredicted RBP14.66□□□□□ -0.06
RCN1-201ENST00000054950 ZNF415Q09FC8 603 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 SPANXA1Q9NS26 97 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 VPREB3Q9UKI3 123 aa14.66□□□□□ -0.06
RCN1-201ENST00000054950 NOTCH3Q9UM47 2321 aa14.65□□□□□ -0.06
RCN1-201ENST00000054950 LINC01356Q8N9X3 169 aa14.65□□□□□ -0.06
RCN1-201ENST00000054950 IGSF10Q6WRI0 2623 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 TEX15Q9BXT5 2789 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 C11orf72Q8NBR9 251 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 WNK1Q9H4A3 2382 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 CHD6Q8TD26 2715 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 GAGE2BQ13066 116 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 GAGE2EQ4V326 116 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 TMEM101Q96IK0 257 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 GAGE2DQ9UEU5 116 aa14.64□□□□□ -0.07
RCN1-201ENST00000054950 KHDC1LQ5JSQ8 128 aa14.63□□□□□ -0.07
RCN1-201ENST00000054950 C2CD3Q4AC94 2353 aa14.63□□□□□ -0.07
RCN1-201ENST00000054950 IGHV3OR16-12A0A075B7B8 117 aa14.62□□□□□ -0.07
RCN1-201ENST00000054950 TTC32Q5I0X7 151 aa14.62□□□□□ -0.07
RCN1-201ENST00000054950 C15orf53Q8NAA6 179 aa14.62□□□□□ -0.07
RCN1-201ENST00000054950 MAP6D1Q9H9H5 199 aa14.62□□□□□ -0.07
RCN1-201ENST00000054950 FAM208BQ5VWN6 2430 aa14.61□□□□□ -0.07
RCN1-201ENST00000054950 ACACBO00763 2458 aa14.61□□□□□ -0.07
RCN1-201ENST00000054950 ZNF469Q96JG9 3925 aaPredicted RBP14.61□□□□□ -0.07
RCN1-201ENST00000054950 IGHV3-53P01767 116 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms