RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Igsf23B2RTN2 239 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Bsph2Q0Q236 131 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Trav15-1-dv6-1Q5R1D2 117 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Cd200r3Q5UKY4 296 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Sco2Q8VCL2 255 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 2200002J24RikQ9D807 110 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Hspb8Q9JK92 196 aa7.36□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Tnfsf11O35235 316 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ucp1P12242 307 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Wipf2Q6PEV3 440 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Elovl5Q8BHI7 299 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Znhit1Q8R331 154 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Nup37Q9CWU9 326 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Mdp1Q9D967 164 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 MtorQ9JLN9 2549 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 BC053393A0A0B4J1F6 192 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm6096D3YTY6 151 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Zfp976E9Q981 636 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ifitm7G3X9Z2 141 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm21913J3KML9 361 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm21776J3QPJ5 361 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Smr2O09133 150 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ca5aP23589 299 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Cox7a2lQ61387 111 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Neil2Q6R2P8 329 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Myct1Q8R411 188 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Leprotl1Q9CQ74 131 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Mrpl13Q9D1P0 178 aaKnown RBP7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Notch3Q61982 2318 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Iglv1A0A075B663 117 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Trav12d-3A0A075B6A4 115 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Trdv2-1A0A0G2JGB9 116 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Zfp648D3Z0W3 525 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 BC030500E9Q6W0 185 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm21900J3QP38 180 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ca2P00920 260 aaKnown RBP7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Hoxb2P0C1T1 354 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Trdv2-2Q5R1A4 116 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Vstm2lQ6PDS0 220 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Duxbl2Q7TNE6 350 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Olfr411Q7TRW8 315 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Snx22Q8C084 192 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 GgctQ9D7X8 188 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm12728V9GX31 77 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Unc79Q0KK59 2596 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Notch4P31695 1964 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Trbv13-3A0A0B4J1H2 113 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 SdcbpO08992 299 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ccl11P48298 97 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Rps20P60867 119 aaKnown RBP7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ube2l3P68037 154 aaKnown RBP7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm11110Q3U4K9 109 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Olfr1367Q8VFG2 316 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gtsf1Q9DAN6 167 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Josd1Q9DBJ6 202 aa7.35□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Gm5129F6YHA9 99 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 9130019O22RikG3X941 543 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Defa37K9J724 93 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Adrb3P25962 400 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Defa5P28312 93 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Tmem40Q4FJU9 225 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Fxyd3Q61835 88 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ypel2Q65Z95 119 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Vma21Q78T54 101 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Cnn3Q9DAW9 330 aaKnown RBP7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Szt2A2A9C3 3431 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Arid1bE9Q4N7 2244 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Trav17A0A075B655 113 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Igkv6-14A0A140T8P1 115 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Ascl2O35885 263 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 SeleQ00690 612 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 OstcQ78XF5 149 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Tmem204Q7TQI0 226 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Cend1Q9JKC6 149 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Tomm40Q9QYA2 361 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 TncQ80YX1 2110 aa7.34□□□□□ -1.23
Col28a1-201ENSMUST00000115537 Sigmar1O55242 223 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Cd5P13379 494 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Tcl1b2P56841 117 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Klk1b24Q61754 263 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 MturnQ8CGA4 131 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Vmn1r237Q8R296 289 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 H1fooQ8VIK3 304 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Pxmp4Q9JJW0 212 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Gpa33Q9JKA5 319 aa7.34□□□□□ -1.24
Col28a1-201ENSMUST00000115537 A0A1L1SR50 188 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Gm6594J3QM43 95 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Oprk1P33534 380 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Gpm6bP35803 328 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Defa24Q5G865 93 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Trdv4Q5R1A3 115 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Wdr83osQ6ZWX0 106 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Nit2Q9JHW2 276 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Sec11aQ9R0P6 179 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Klk4Q9Z0M1 255 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Gm27027S4R1M6 97 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Brwd1Q921C3 2304 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Usf3B2RUQ2 2221 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Lrrk1Q3UHC2 2014 aa7.33□□□□□ -1.24
Col28a1-201ENSMUST00000115537 Zfp493E9Q1L8 384 aa7.33□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms