RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 F7P70375 446 aa20.45■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Cxcr6Q9EQ16 351 aa20.45■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Sdk1Q3UH53 2193 aa20.45■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Col6a4A2AX52 2309 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Ighv8-2A0A0A6YW58 119 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Trav13n-4A0A0G2JG01 110 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Zfp493E9Q1L8 384 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Defb30Q30KN4 75 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr1475Q8VEV6 314 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Rpp25lQ99JH1 163 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 CklfQ9DAS1 152 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Ms4a4bQ9ES61 226 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Rhox4bQ9JI43 205 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gpr34Q9R1K6 375 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Pus1Q9WU56 423 aa20.44■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Igkv1-132A0A0B4J1H9 120 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Cmtm2bQ9DAC0 210 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 AcanQ61282 2132 aaKnown RBP20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 OtoglF7A4A7 2325 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 IfngP01580 155 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 P01915 264 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 P04944 107 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 PpoxP51175 477 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Cd84Q18PI6 329 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 HaaoQ78JT3 286 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 AdtrpQ8C138 230 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr958Q8VEY3 312 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gpa33Q9JKA5 319 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Atoh7Q9Z2E5 149 aa20.43■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Cep250Q60952 2414 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gm37388A0A0A6YY46 143 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Igkv4-57A0A0A6YYE7 117 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Ighv1-69A0A0G2JFS5 117 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Zfp708F8VPP0 541 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 HexbP20060 536 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gm9733Q1AN91 178 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Zfand3Q497H0 227 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr1386Q7TQT0 309 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr1535Q7TQU0 326 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Mrpl27Q99N92 148 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Ndufa6Q9CQZ5 131 aaKnown RBP20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Lelp1Q9DAE3 120 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr972Q9EQA2 314 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 PigpQ9JHG1 132 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Pfdn5Q9WU28 154 aa20.42■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gm20422E9PUR3 255 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Psg19Q4KL31 475 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gng10Q9CXP8 68 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Arpc1aQ9R0Q6 370 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Mamld1P0C6A2 803 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr1026Q7TR90 307 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Psg22Q810J1 475 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 SelenofQ9ERR7 162 aa20.41■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Tmem167bQ80X45 74 aa20.4■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Gm4763Q8CFJ5 196 aa20.4■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Q9D9C7 252 aa20.4■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Ighv1-39A0A075B5V5 117 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 ElobP62869 118 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 CluQ06890 448 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 ParlQ5XJY4 377 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Uqcc1Q9CWU6 295 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 1700008P02RikQ9DAJ8 175 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Rnase4Q9JJH1 148 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Nubp1Q9R060 320 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Pard6aQ9Z101 346 aa20.39■□□□□ 0.86
Tpm1-216ENSMUST00000113707 Olfr1189A2AV11 306 aa20.39■□□□□ 0.85
Tpm1-216ENSMUST00000113707 P01789 122 aa20.39■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Zfp36l1P23950 338 aa20.39■□□□□ 0.85
Tpm1-216ENSMUST00000113707 1700009N14RikQ14AA6 216 aaKnown RBP20.39■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Nanos1Q80WY3 267 aa20.39■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Pf4Q9Z126 105 aa20.39■□□□□ 0.85
Tpm1-216ENSMUST00000113707 F5O88783 2183 aa20.38■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Ankrd11E9Q4F7 2643 aa20.38■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Ighv3-1A0A075B5S6 116 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Ccl21aP84444 133 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Ccl21bP86792 133 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Ccl21cP86793 133 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Rhox4cQ2MDG1 205 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Gm9945Q8BNZ3 91 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 A930004D18RikQ8C8W7 157 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Rhox4aQ9D3I8 205 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Cmya5Q70KF4 3739 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Trbv31A0A075B5J5 111 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Trav23A0A0G2JG17 115 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Hbb-bh2B2RVB7 147 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Thap8E9Q695 213 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Gm5129F6YHA9 99 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Il3raP26952 396 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 NdpP48744 131 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 SrstQ06666 185 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Rph3alQ768S4 302 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 RpeQ8VEE0 228 aa20.37■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Trav6n-5A0A075B621 112 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Trav6-5A0A075B6B5 112 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 H2al1jA2BFR3 109 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Gm21616B6ZB74 166 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Cd74P04441 279 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Sult1a1P52840 291 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Prickle3Q80VL3 624 aa20.36■□□□□ 0.85
Tpm1-216ENSMUST00000113707 Gm17334Q8C6U3 126 aa20.36■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 100.9 ms