RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Csn1s2bP02664 143 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Muc13P19467 573 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Mfge8P21956 463 aaKnown RBP16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 PpoxP51175 477 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Fam25cQ8CF02 89 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Cxcr6Q9EQ16 351 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Rnd2Q9QYM5 227 aa16.71■□□□□ 0.27
Ccdc88a-202ENSMUST00000109477 Ifna4P07351 186 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Arg1Q61176 323 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Znrf2Q71FD5 238 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr335-psQ7TRY6 312 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Cdc34Q8CFI2 235 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Igkv14-130A0A0G2JF45 117 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Zfp971A2BFG8 470 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm14288E9Q9W0 88 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm20532G3UXR8 106 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Mamld1P0C6A2 803 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Sf3a2Q62203 475 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Bst1Q64277 311 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr1382Q7TQT3 311 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Zim1Q8C393 579 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Vmn1r66Q8K4I0 310 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Btbd17Q9DB72 478 aa16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Eif3gQ9Z1D1 320 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Trbv31A0A075B5J5 111 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Ighv7-3A0A075B5R2 120 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr912A0A1L1SSS5 310 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr282A1L1B4 308 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Tstd1E9PY03 133 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr978E9Q985 311 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Trat1Q3UU67 187 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 1700057G04RikQ3V0U0 232 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Q497N7 227 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Fam174bQ8K064 153 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 HaghQ99KB8 309 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Prss1Q9Z1R9 246 aa16.69■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr1291-ps1A0A286YE47 326 aa16.68■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 P04944 107 aa16.68■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Rplp1P47955 114 aa16.68■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Olfr749E9Q438 313 aa16.67■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gata2O09100 480 aa16.67■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Hist1h1tQ07133 208 aa16.67■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Psmb6Q60692 238 aa16.67■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gpa33Q9JKA5 319 aa16.67■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Pard6aQ9Z101 346 aa16.67■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Efnb3O35393 340 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Adrb3P25962 400 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 1810024B03RikQ8BWE1 200 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 AdtrpQ8C138 230 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Uqcr10Q8R1I1 64 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Q9CX25 107 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Tmem210Q9D2F0 147 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 EppinQ9DA01 134 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Rnase4Q9JJH1 148 aa16.66■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 BC053393A0A0B4J1F6 192 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Myod1P10085 318 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 SelenotP62342 195 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 RhobP62746 196 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Oosp2Q4FZG8 168 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Pth2Q91W27 100 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Scp2d1Q9DAH1 156 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Crlf1Q9JM58 425 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm20773A0A0A6YXW2 232 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm20807A0A0A6YXX7 232 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Trav13n-4A0A0G2JG01 110 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm20873J3QMQ9 232 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm20795J3QP49 232 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm21310J3QQ23 232 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Ndufb11O09111 151 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Gm21440Q3TTD8 232 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Lrcol1Q3URS3 161 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Minos1Q7TNS2 76 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Pef1Q8BFY6 275 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Dusp18Q8VE01 188 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Efcab10Q9D581 132 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Smdt1Q9DB10 107 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Crybb3Q9JJU9 211 aa16.65■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Tenm3Q9WTS6 2715 aa16.64■□□□□ 0.26
Ccdc88a-202ENSMUST00000109477 Nf1Q04690 2841 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 BsnO88737 3942 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 MtorQ9JLN9 2549 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rnf212bD3Z423 297 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Hmx3P42581 356 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Defa11P50709 85 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Fam206aQ80ZQ9 193 aaKnown RBP16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 D630044L22RikQ8C701 164 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Galnt11Q921L8 608 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gpr132Q9Z282 382 aa16.64■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm5089A1L3C8 106 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm21775J3KMK6 180 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 PlaurP35456 327 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 HrkP62816 92 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr323Q5NCD0 323 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Trav2Q5R1I9 109 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr1472Q7TQQ9 314 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Prr9Q8BV84 116 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Ccdc198Q9CPZ1 294 aa16.63■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Fam78bQ8BQN5 261 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Spink10Q8CAC8 162 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr480Q8VEZ0 312 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms