RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Cd33Q63994 403 aa6.84□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ormdl3Q9CPZ6 153 aa6.84□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Sec11aQ9R0P6 179 aa6.84□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Rnf7Q9WTZ1 113 aa6.84□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Cacng7P62956 275 aa6.84□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm12888Q3UW77 119 aa6.84□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Adamts20P59511 1906 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trbv1A0A0B4J1G7 116 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Clpsl2Q3UW21 102 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tmem178aQ9CZ16 297 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm42517A0A1Y7VLQ2 374 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr235E9Q9Z6 312 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Mst1P26928 716 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gsx1P31315 261 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ighv5-16A0A0B4J1P4 117 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Q0VG49 157 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tspan7Q62283 249 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm20854Q62461 227 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ube2cQ9D1C1 179 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Mfap4Q9D1H9 257 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gata2O09100 480 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ccl5P30882 91 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gng5Q80SZ7 68 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Cphx2Q8BX39 182 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr476Q8VGI4 310 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav4-2A0A075B638 110 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav7-5A0A0G2JFX6 112 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ins2P01326 110 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Hint1P70349 126 aaKnown RBP6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Prss57Q14B24 284 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Mex3bQ69Z36 601 aaKnown RBP6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Rln3Q8CHK2 141 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr1367Q8VFG2 316 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ndufa7Q9Z1P6 113 aaKnown RBP6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav6n-5A0A075B621 112 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav6-5A0A075B6B5 112 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr1258Q8VGN6 311 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Rai1Q61818 1889 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm10428J3QNV7 132 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ankrd55Q8BLD6 626 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav5-1A0A075B5Z7 114 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr1369-ps1A0A140T8K7 317 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr1331K7N684 317 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 C2cd4dP0CG09 341 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 UngP97931 306 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr1382Q7TQT3 311 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr263Q7TQT8 317 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 SprnQ8BWU1 147 aa6.83□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Loxl4Q924C6 757 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Klk1b27Q9JM71 263 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm35549A0A0N4SUS7 141 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm4881A0A140LIR9 352 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm5111Q8C9M4 190 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 ChodlQ9CXM0 273 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Dkk2Q9QYZ8 259 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Cisd3B1AR13 137 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 P01746 140 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Masp2Q91WP0 685 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Igkv6-20A0A140T8P2 115 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Fam240bJ3QMB3 78 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ccl4P14097 92 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tnfrsf26P83626 204 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Vmn1r197Q8R265 298 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Lnp1A0A1B0GSK3 178 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Sfxn3Q91V61 321 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ighv1-47A0A0A6YY41 117 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ssc4dA1L0T3 586 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 GchfrP99025 84 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tmem177Q8BPE4 311 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tmem42Q9CR22 157 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Igkv4-86A0A0G2JGE7 114 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 4931422A03RikA2BHN9 113 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Fam53aE9PV82 402 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Hoxd11P23813 323 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tspan13Q9D8C2 204 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Crim1Q9JLL0 1037 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Alox12bO70582 701 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 SeleQ00690 612 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Defb46Q4QY34 57 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Nxph1Q61200 271 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Zfpl1Q9DB43 310 aa6.82□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tstd1E9PY03 133 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ssbp4Q3U4B1 363 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Fam89bQ9QUI1 189 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tnfsf14Q9QYH9 239 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Egr4Q9WUF2 478 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Q9DAS2 200 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Ighv1-67A0A0G2JFN9 117 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav12d-1A0N8R0 115 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Rnf212F6TQD1 307 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 PpyP10601 100 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 CirbpP60824 172 aaKnown RBP6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Col9a1Q05722 921 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Wfdc9Q3UW41 83 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 SostQ99P68 211 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 MscO88940 201 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Tmem241Q3UME2 297 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 H2al1nQ497L1 109 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Foxl1Q64731 336 aa6.81□□□□□ -1.32
Scn8a-204ENSMUST00000108909 CklfQ9DAS1 152 aa6.81□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms