RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ndufb3Q9CQZ6 104 aa18.04■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Vsig2Q9Z109 328 aa18.04■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Gm17660B9UIU9 90 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Vmn1r78K7N608 313 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Gm20767O70517 169 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Sf3a2Q62203 475 aaKnown RBP18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Znrd1Q791N7 123 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Pef1Q8BFY6 275 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 MmdQ9CQY7 238 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Smco4Q9JIS3 59 aa18.03■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Ighv9-4A0A0A6YWH6 117 aa18.02■□□□□ 0.48
Scn1b-201ENSMUST00000098548 SelenotP62342 195 aa18.02■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Aadacl4Q8BM81 407 aa18.02■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Tma7Q8K003 64 aaKnown RBP18.02■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Olfr1475Q8VEV6 314 aa18.02■□□□□ 0.48
Scn1b-201ENSMUST00000098548 Tenm3Q9WTS6 2715 aa18.02■□□□□ 0.47
Scn1b-201ENSMUST00000098548 1700015F17RikD3YUK8 150 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Spsb3Q571F5 354 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 5730522E02RikQ5SP45 163 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 HaaoQ78JT3 286 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Glrx5Q80Y14 152 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Mrps26Q80ZS3 200 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Zfp459Q8BZ17 267 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Exosc2Q8VBV3 293 aaKnown RBP18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr211Q8VGH2 309 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Insig2Q91WG1 225 aa18.01■□□□□ 0.47
Scn1b-201ENSMUST00000098548 1700067P10RikG3X8U2 183 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Cldn34c3J3QJW5 233 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Cldn34c2J3QNM1 233 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 AmtQ8CFA2 403 aaKnown RBP18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Cldn34c1Q8K193 234 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr113Q8VEU4 312 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr1294Q8VGE5 312 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr1242Q8VGM6 306 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Rbmxl1Q91VM5 388 aaKnown RBP18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Fam210bQ9D8B6 190 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr912A0A1L1SSS5 310 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 FusP56959 518 aaKnown RBP18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 F7P70375 446 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Slc25a31Q3V132 320 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Rnf182Q8C432 247 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Q8C708 225 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Ppp1r14aQ91VC7 147 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 VsirQ9D659 308 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Pla2g2dQ9WVF6 144 aa18■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Zfp950A0A0U1RQ46 609 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Fut1O09160 376 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Cnih1O35372 144 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 P01659 112 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Hes1P35428 282 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Gnb1P62874 340 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Gm9733Q1AN91 178 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr305Q7TS02 319 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Smim19Q80ZU4 107 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Gm12728V9GX31 77 aa17.99■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Zfp980A2A9J5 645 aa17.98■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Loxl2P58022 776 aa17.98■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Poc1aQ8JZX3 405 aa17.98■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr495Q8VF12 330 aa17.98■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Pfdn5Q9WU28 154 aa17.98■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Ighv5-6A0A075B5Q0 117 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Trav4-4-dv10A0A075B651 110 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Scgb1b29D2XZ31 93 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Scgb1b20E9PWZ2 93 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Znf431E9QAG8 526 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Efnb3O35393 340 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Gal3st4Q3V1B8 480 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr917Q7TRC3 309 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr335-psQ7TRY6 312 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 GaptQ8CB93 157 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Ido2Q8R0V5 405 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Ms4a6dQ99N07 247 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 4933414I15RikQ9D4D5 133 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Q9D9C7 252 aa17.97■□□□□ 0.47
Scn1b-201ENSMUST00000098548 HexbP20060 536 aa17.96■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Gpr183Q3U6B2 357 aa17.96■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Mrpl18Q9CQL5 180 aa17.96■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Rpusd4Q9CWX4 377 aaKnown RBP17.96■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Q9CX63 252 aa17.96■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Olfr972Q9EQA2 314 aa17.96■□□□□ 0.47
Scn1b-201ENSMUST00000098548 Fut9O88819 359 aa17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Csn2P10598 231 aa17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 C1qtnf9Q4ZJN1 333 aa17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 TecrQ9CY27 308 aa17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tmem190Q9D2E9 166 aa17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Bola1Q9D8S9 137 aaKnown RBP17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Cmtm2bQ9DAC0 210 aa17.96■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Slc45a2P58355 530 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tmem167bQ80X45 74 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm26566Q8CAC1 153 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr702Q920Z2 318 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tmem170aQ9D342 144 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Ms4a4bQ9ES61 226 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Pard6aQ9Z101 346 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Pf4Q9Z126 105 aa17.95■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Nf1Q04690 2841 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Cacna1iE9Q7P2 2199 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 CubnQ9JLB4 3623 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Rnf212bD3Z423 297 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Vmn1r194J3JS27 296 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms