RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Bmpr1bP36898 502 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 SnrpeP62305 92 aaKnown RBP6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cd300lbQ3U497 209 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cdkn2aQ64364 169 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tmem41bQ8K1A5 291 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 HaghQ99KB8 309 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Spink12Q9D256 87 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 PifoQ9D9W1 207 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm15557A6PWY0 234 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm15293D3YX02 93 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm8653K9J7G2 307 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Vmn1r117L7N2C9 307 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 TcapO70548 167 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Bmp5P49003 452 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 BsxQ810B3 232 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm9945Q8BNZ3 91 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 BC049762Q8C601 163 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Slc37a1Q8R070 531 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr223Q8VF69 319 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 ManfQ9CXI5 179 aaKnown RBP6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Fbxo24Q9D417 589 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Try5Q9QUK9 246 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Nubp1Q9R060 320 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Try4Q9R0T7 246 aa6.9□□□□□ -1.31
Trim39-201ENSMUST00000042717 Iglv1A0A075B663 117 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Scgb1b11A0A087WQJ0 93 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm17455G3UW87 128 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Scgb1b2O35176 93 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Serf2P84102 59 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Spem1Q5F289 310 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rnase2aQ8K196 155 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Cdpf1Q8R3A2 119 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr958Q8VEY3 312 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Map1lc3bQ9CQV6 125 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Q9CRC3 126 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tmem170aQ9D342 144 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gcn1E9PVA8 2671 aaKnown RBP6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ighv5-6A0A075B5Q0 117 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 1700015F17RikD3YUK8 150 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm21732J3QM79 361 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm21921J3QNB5 361 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 P01728 117 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gpm6bP35803 328 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rplp1P47955 114 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 CluQ06890 448 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Trat1Q3UU67 187 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 9430097D07RikQ8BS47 195 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm17334Q8C6U3 126 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rgs13Q8K443 158 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Lhfpl3Q9CTN8 222 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 EppinQ9DA01 134 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Smco4Q9JIS3 59 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gpa33Q9JKA5 319 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tbx21Q9JKD8 530 aa6.89□□□□□ -1.31
Trim39-201ENSMUST00000042717 MtorQ9JLN9 2549 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm6993A0A1W2P738 69 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr282A1L1B4 308 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm17660B9UIU9 90 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm20532G3UXR8 106 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rab19P35294 217 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 PpoxP51175 477 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Zfand3Q497H0 227 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rbfox2Q8BP71 449 aaKnown RBP6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Pgam5Q8BX10 288 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tmem190Q9D2E9 166 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Supt4h1bQ9Z199 117 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Nf1Q04690 2841 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr196E9PYP4 309 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm10638F6QEG2 257 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 A630076J17RikJ3QQ32 107 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Defa11P50709 85 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ube2g2P60605 165 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 HrkP62816 92 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 SeleQ00690 612 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Slc25a31Q3V132 320 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 LgalslbQ7TPX9 165 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr917Q7TRC3 309 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 AmtQ8CFA2 403 aaKnown RBP6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Cdc34Q8CFI2 235 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Vmn1r225Q8R2A5 298 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rpusd4Q9CWX4 377 aaKnown RBP6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Cited4Q9WUL8 182 aa6.88□□□□□ -1.31
Trim39-201ENSMUST00000042717 Zfp109A0A0U1RPC5 652 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm45783A0A1B0GT48 74 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm17727E9Q4V7 109 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 BlcapP62951 87 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr323Q5NCD0 323 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Commd9Q8K2Q0 198 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr480Q8VEZ0 312 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr654Q8VF27 341 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Mrpl16Q99N93 251 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Myo18bE9PV66 2605 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Trav9-1A0A075B601 112 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Zfp971A2BFG8 470 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm14288E9Q9W0 88 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rpp30O88796 268 aaKnown RBP6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rhox4fQ2MDF8 205 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rhox4cQ2MDG1 205 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Q497N7 227 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Q6PIU9 354 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms