RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 AcanQ61282 2132 aaKnown RBP14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm12888Q3UW77 119 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Vmn1r70Q8R254 298 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Mcrip2Q9CQB2 160 aaKnown RBP14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 IcosQ9WVS0 200 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr1337A2ACY8 315 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Srsf1Q6PDM2 248 aaKnown RBP14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Plxna4Q80UG2 1893 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr223Q8VF69 319 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Sft2d3Q9CSV6 209 aa14.06□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm20458E9PXJ7 78 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Eif4ebp2P70445 120 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Zfp707F6QUN2 391 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm27021M0QWE2 156 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Q149G0 166 aaKnown RBP14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm4881A0A140LIR9 352 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Oosp2Q4FZG8 168 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Loxl4Q924C6 757 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tmem29A2ANF5 204 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Prss30Q9QYZ9 310 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Efnb1P52795 345 aa14.05□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Klk7Q91VE3 249 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gpx7Q99LJ6 186 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Wdr31Q9JHB4 367 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tcrg-V6A0A075B5Y8 134 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trbv1A0A0B4J1G7 116 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Igkv4-50A0A0B4J1J0 117 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Il9P15247 144 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr1419Q7TQS2 343 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Rbfox3Q8BIF2 374 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm45521A0A1B0GRK0 198 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 C1ql4Q4ZJM9 238 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tmem91Q8C581 172 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr976Q8VF15 326 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Lipt2Q9D009 231 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Mixl1Q9WUI0 231 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 P18530 117 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Rspo2Q8BFU0 243 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Arpc1aQ9R0Q6 370 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trav7n-5A0A075B604 112 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trav7-4A0A075B6C1 113 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trav7d-4Q5R1H9 113 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Foxb2Q64733 428 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trav4-4-dv10A0A075B651 110 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr476Q8VGI4 310 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr139Q60891 315 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Pla2g3Q8BZT7 504 aa14.04□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Cspg4Q8VHY0 2327 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 H2-M10.4Q85ZW8 331 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr1323Q8VF35 309 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Fam89bQ9QUI1 189 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Zic3Q62521 466 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Mrps36Q9CQX8 102 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 V1ra8Q9EQ48 279 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tmem238A9JSM3 176 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Ifitm7G3X9Z2 141 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Ssbp3Q9D032 388 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr975Q8VG91 310 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trav7-5A0A0G2JFX6 112 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm933J3QPC1 141 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Zfp27P10077 819 aa14.03□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm21983D6RFS9 131 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Spink2Q8BMY7 86 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Nrn1Q8CFV4 142 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Fer1l4A3KGK3 1992 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Trav6-1A0A075B5Z8 112 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 ChodlQ9CXM0 273 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Igh-3P01867 404 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Tcrg-V1P06325 135 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Olfr433Q7TRV9 314 aa14.02□□□□□ -0.16
Ccdc88a-201ENSMUST00000040182 Gm29644A0A087WPG2 191 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 1700015F17RikD3YUK8 150 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Glrx5Q80Y14 152 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Itgbl1Q8VDV0 494 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 H2al2bA9Z055 111 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Defa1P11477 93 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 OstcQ78XF5 149 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Slc25a15Q9WVD5 301 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Tmem170aQ9D342 144 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Iqcf6G3UWF2 157 aa14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 PpifQ99KR7 206 aaKnown RBP14.02□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Defa2P28309 93 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Fblim1Q71FD7 375 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Paqr4Q9JJE4 273 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Srp19Q9D7A6 144 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 E430018J23RikE9PZQ8 461 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Prss33Q80WM7 277 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Amn1B8JKV0 258 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 F11rO88792 300 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Ube2zQ3UE37 356 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Tmprss12Q3V0Q7 336 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Il1f10Q8R459 152 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm10428J3QNV7 132 aa14.01□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm36368A0A1D5RLK8 91 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm21731A0A286YDE9 180 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 MalO09198 153 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Foxa3P35584 353 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gnb1lQ9EQ15 326 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Nup210Q9QY81 1886 aaKnown RBP14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Ankrd55Q8BLD6 626 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 138.8 ms