RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Znf641Q8BZ34 422 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 H2afb1Q9CQ70 111 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 AhspQ9CY02 102 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr1189A2AV11 306 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm9945Q8BNZ3 91 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Eda2rQ8BX35 297 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr1012Q8VFJ7 311 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ascl3Q9JJR7 174 aa9.37□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Abca4O35600 2310 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 P01659 112 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 AsipQ03288 131 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr1178Q7TR20 323 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Srsf7Q8BL97 267 aaKnown RBP9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Arid1bE9Q4N7 2244 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr965Q7TRA7 312 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr1265Q8VEZ3 309 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ssbp2Q9CYZ8 361 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ighv9-1A0A0B4J1P3 117 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm20708H3BKF4 155 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr143P34985 313 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ypel3P61237 119 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Isg15Q64339 161 aaKnown RBP9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr958Q8VEY3 312 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Trav3n-3A0A0G2JEM0 114 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Igkv14-100A0A0G2JG36 117 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm45213A0A0U1RNZ6 101 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm6993A0A1W2P738 69 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm21913J3KML9 361 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm21776J3QPJ5 361 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Klf12O35738 402 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Spink2Q8BMY7 86 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tm4sf20Q9CQY8 226 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr961Q9EQ84 314 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Lsm4Q9QXA5 137 aaKnown RBP9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 EsdQ9R0P3 282 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Npc2Q9Z0J0 149 aa9.36□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tarm1B6A8R8 288 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Prdm6Q3UZD5 596 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 AgerQ62151 402 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr25Q7TRD6 313 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Fam168aQ8BGZ2 244 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Zc2hc1aQ8BJH1 324 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr127Q8VF25 323 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr76Q8VFV2 317 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Golt1bQ9CR60 138 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr1369-ps1A0A140T8K7 317 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Defa34D3Z0J0 93 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Smim15Q3UTD9 74 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Wdr82Q8BFQ4 313 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tctex1d2Q9CQ66 144 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Trav6n-5A0A075B621 112 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Trav6-5A0A075B6B5 112 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ighv1-15A0A0A6YXA5 117 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm21732J3QM79 361 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm21921J3QNB5 361 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm5426J3QNM7 103 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 MyadmO35682 320 aaKnown RBP9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 P01728 117 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tff3Q62395 81 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Slc25a48Q8BW66 306 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Tmem91Q8C581 172 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Hyls1Q9CXX0 307 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Zdhhc16Q9ESG8 361 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Lamtor2Q9JHS3 125 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 P01680 129 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr263Q7TQT8 317 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr476Q8VGI4 310 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gab2Q9Z1S8 665 aa9.35□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Trav12d-3A0A075B6A4 115 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Igkv13-84A0A140T8N3 115 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Mex3bQ69Z36 601 aaKnown RBP9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Rln3Q8CHK2 141 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Crybb1Q9WVJ5 250 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm26920S4R2A5 56 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Zfyve26Q5DU37 2529 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gm20458E9PXJ7 78 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Q9CR34 168 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Mmp17Q9R0S3 578 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ighv7-4A0A0A6YXL5 121 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Plscr4P58196 326 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 GchfrP99025 84 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Vmn1r195Q5SVD6 316 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Zcchc24B2RVL6 241 aaKnown RBP9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Gfra3O35118 397 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Neurog3P70661 214 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Ube2v1Q9CZY3 147 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Olfr954Q9EQB6 314 aa9.34□□□□□ -0.91
Topbp1-201ENSMUST00000035164 Samt3A2ARK7 233 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Brs3O54798 399 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Lcn2P11672 200 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Dscaml1Q4VA61 2053 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Tbr1Q64336 681 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gpbar1Q80SS6 329 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Lrrc25Q8K1T1 297 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 H2-M10.4Q85ZW8 331 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 F5O88783 2183 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ighv1-26A0A075B5V0 117 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Scgb1b11A0A087WQJ0 93 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 P01759 136 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr149Q60888 311 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms