RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rbmy1a1O35698 380 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Hoxb3P09026 433 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ly6fP35460 134 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Stac2Q8R1B0 408 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Lrrc26Q91W20 331 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 TracA0A075B662 137 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm12845A0A0N4SUM5 588 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr1369-ps1A0A140T8K7 317 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 TcraP01849 138 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Shisa6Q3UH99 525 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr1373Q7TQT6 311 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr139Q60891 315 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 OpalinQ7M750 143 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ankrd55Q8BLD6 626 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tmem238A9JSM3 176 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tnfsf11O35235 316 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 P01822 137 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Morn3Q8C5T4 241 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 TifabQ8JZM6 147 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr364-ps1A0A140T8Q2 307 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm2381G3UY53 305 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Dmrtc2Q8CGW9 370 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 4930447A16RikQ9D5F6 132 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 P01635 115 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 GlulP15105 373 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 SellP18337 372 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 GgactQ923B0 149 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tmem100Q9CQG9 134 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ramp3Q9WUP1 147 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 PtprfA2A8L5 1898 aa11.83□□□□□ -0.51
Col5a1-201ENSMUST00000028280 1700067P10RikG3X8U2 183 aa11.83□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Shisal1Q0VBP7 198 aa11.83□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ormdl2Q9CQZ0 153 aa11.83□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ripply2Q2WG76 128 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Clpsl2Q3UW21 102 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 LgalslbQ7TPX9 165 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Plppr1Q8BFZ2 325 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm21983D6RFS9 131 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ucp1P12242 307 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Zfp959Q91VM8 539 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 CklfQ9DAS1 152 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Il17bQ9QXT6 180 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Igkv12-44A0A140T8M2 115 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 A0A286YE02 88 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Foxg1Q60987 481 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ighv5-16A0A0B4J1P4 117 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bmP10854 126 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bhQ64478 126 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist2h2bbQ64525 126 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Klk7Q91VE3 249 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 FancmQ8BGE5 2021 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm13030A2APQ6 143 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 F12Q80YC5 597 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ifitm5O88728 134 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm10767Q3TQP0 103 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tmem241Q3UME2 297 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Chchd2Q9D1L0 153 aa11.83□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Col6a4A2AX52 2309 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Trbv3A0A0A6YYE2 117 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Defb46Q4QY34 57 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Rtn4rl2Q7M6Z0 420 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Olfr984Q8VFN1 314 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Prb1Q91X93 504 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Phf7Q9DAG9 307 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Dusp14Q9JLY7 198 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm45213A0A0U1RNZ6 101 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Olfr1402Q8VET1 320 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm17660B9UIU9 90 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 P01661 131 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 P01662 111 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 P01663 111 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Hspe1Q64433 102 aaKnown RBP11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Olfr263Q7TQT8 317 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Pcnx2Q5DU28 2122 aa11.82□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm15093A2BI72 449 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm15097E9QA14 449 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Foxa2P35583 459 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Znf691Q3TDE8 283 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Ssbp4Q3U4B1 363 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tmem40Q4FJU9 225 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Olfr317Q5NCD6 327 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Dmrt3Q80WT2 476 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Rnase2aQ8K196 155 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Pla2g2fQ9QZT4 168 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Fam214bQ8BR27 538 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Lrrc25Q8K1T1 297 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 5530401A14RikQ9D3H9 131 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm9772F6XPD8 135 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Slurp1Q9Z0K7 110 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Igkv4-70A0A0B4J1I5 116 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Kif26aQ52KG5 1881 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 2410004P03RikA0A087WQY2 205 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm42543A0A0G2JET4 117 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Gm4788E9Q8B5 879 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Adrb3P25962 400 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Prr14lE9Q7C4 1971 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tcrg-V1P06325 135 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 4930583I09RikQ9D2E3 102 aa11.81□□□□□ -0.52
Col5a1-201ENSMUST00000028280 Tmem170aQ9D342 144 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms