RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Prss28Q924N9 274 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 PtprbB2RU80 1998 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Iglc1A0A0G2JE99 106 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm45521A0A1B0GRK0 198 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Olfr1458A0A1L1SSD5 307 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Mtatp6P00848 226 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 P01659 112 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 NpsP0C0P8 89 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Cox5aP12787 146 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Cd3eP22646 189 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Fkbp2P45878 140 aaKnown RBP9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Ctsll3Q3ULP7 331 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Grb2Q60631 217 aaKnown RBP9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 DhhQ61488 396 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Znf641Q8BZ34 422 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Sco2Q8VCL2 255 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Pcnx1Q9QYC1 2344 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Trav6n-6A0A075B6B2 114 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Olfr251E9Q891 316 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm10097J3KMK7 105 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Smlr1J3QMJ4 66 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Fgfbp1O70514 251 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Bcl2P10417 236 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Q3U1D9 316 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Q3U595 105 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Defa24Q5G865 93 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Olfr996Q7TRA0 314 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Fam168aQ8BGZ2 244 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gpr84Q8CIM5 396 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Kcnip1Q9JJ57 227 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Cldn14Q9Z0S3 239 aa9.53□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Trav6-6A0A075B603 114 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ighv6-7A0A0A6YWU3 119 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Vmn1r1E9PVR6 306 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ccl1P10146 92 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Gpm6bP35803 328 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav5d-4Q5R1F6 114 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ccl12Q62401 104 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Olfr358Q7TRY5 330 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 StradbQ8K4T3 418 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Sec11aQ9R0P6 179 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Gm15293D3YX02 93 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Tnfrsf1aP25118 454 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Rasl11aQ6IMB1 242 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Zfp273Q7M6W8 501 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Rps19bp1Q8C6B9 143 aaKnown RBP9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Slamf6Q9ET39 351 aa9.52□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Mpig6bD7PDD4 242 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Efnb3O35393 340 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Amy2P00688 508 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Muc15Q8C6Z1 331 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Borcs8Q9D6Y4 120 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Akap9Q70FJ1 3797 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Gvin1Q80SU7 2427 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav7-4A0A075B6C1 113 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Psg18B2RSG7 476 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Hint1P70349 126 aaKnown RBP9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav7d-4Q5R1H9 113 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Prrg4Q8BGN6 226 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 TdhQ8K3F7 373 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 SpenQ62504 3644 aaKnown RBP9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav4-2A0A075B638 110 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ighv8-4A0A0A6YW26 117 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Gm37388A0A0A6YY46 143 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Dhrs3O88876 302 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ang6Q5GAN0 147 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Prss46Q5M8S2 314 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Foxb1Q64732 325 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Srd5a2Q99N99 254 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Tmem147Q9CQG6 224 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 CtrlQ9ER05 264 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Rspo1Q9Z132 265 aa9.51□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Gm45844A0A1B0GRQ2 137 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Defa34D3Z0J0 93 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ifna6P07350 189 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Cks2P56390 79 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ripply2Q2WG76 128 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Q8BTG6 205 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Mbnl3Q8R003 342 aaKnown RBP9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Fscn3Q9QXW4 498 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 KalrnA2CG49 2964 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav16d-dv11A0A075B617 117 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav16nA0A075B634 117 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trdv2-1A0A0G2JGB9 116 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Zfp979A2A799 407 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Ca2P00920 260 aaKnown RBP9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 P01680 129 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Prdm6Q3UZD5 596 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trdv2-2Q5R1A4 116 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Trav15-1-dv6-1Q5R1D2 117 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Foxg1Q60987 481 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Rhbdd2Q8VEK2 361 aa9.5□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Olfr912A0A1L1SSS5 310 aa9.49□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Tstd1E9PY03 133 aa9.49□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Rnf212F6TQD1 307 aa9.49□□□□□ -0.89
Sdc1-201ENSMUST00000020911 F2rl2O08675 369 aa9.49□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Pdcd6P12815 191 aaKnown RBP9.49□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Gm5615Q3UW02 101 aa9.49□□□□□ -0.89
Sdc1-201ENSMUST00000020911 Vwc2lQ505H4 222 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms