RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 M0QY20 66 aa11.08□□□□□ -0.64
RGPD1-205ENST00000641339 SPATA12Q7Z6I5 190 aa11.08□□□□□ -0.64
RGPD1-205ENST00000641339 PCLOQ9Y6V0 5065 aa11.08□□□□□ -0.64
RGPD1-205ENST00000641339 GATCO43716 136 aaKnown RBP11.07□□□□□ -0.64
RGPD1-205ENST00000641339 FOXA3P55318 350 aaPredicted RBP11.06□□□□□ -0.64
RGPD1-205ENST00000641339 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
RGPD1-205ENST00000641339 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
RGPD1-205ENST00000641339 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
RGPD1-205ENST00000641339 NIT1Q86X76 327 aa11.06□□□□□ -0.64
RGPD1-205ENST00000641339 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
RGPD1-205ENST00000641339 A0A087WTM6 91 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 TRBV6-8A0A0A6YYG3 113 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 A8MWL6 223 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 C16orf90A8MZG2 172 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 MGPP08493 103 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 TWIST1Q15672 202 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 CT83Q5H943 113 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
RGPD1-205ENST00000641339 RYR1P21817 5038 aa11.04□□□□□ -0.64
RGPD1-205ENST00000641339 LAGE3Q14657 143 aa11.04□□□□□ -0.64
RGPD1-205ENST00000641339 TMEM241Q24JQ0 296 aa11.04□□□□□ -0.64
RGPD1-205ENST00000641339 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
RGPD1-205ENST00000641339 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
RGPD1-205ENST00000641339 LRCOL1A6NCL2 159 aa11.03□□□□□ -0.64
RGPD1-205ENST00000641339 PEA15Q15121 130 aa11.03□□□□□ -0.64
RGPD1-205ENST00000641339 PGLYRP4Q96LB8 373 aa11.03□□□□□ -0.64
RGPD1-205ENST00000641339 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
RGPD1-205ENST00000641339 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
RGPD1-205ENST00000641339 Q9HAA7 133 aa11.03□□□□□ -0.64
RGPD1-205ENST00000641339 HSPG2P98160 4391 aa11.02□□□□□ -0.65
RGPD1-205ENST00000641339 RPL23P62829 140 aaKnown RBP11.02□□□□□ -0.65
RGPD1-205ENST00000641339 RASL11AQ6T310 242 aa11.02□□□□□ -0.65
RGPD1-205ENST00000641339 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
RGPD1-205ENST00000641339 ISOC2Q96AB3 205 aa11.02□□□□□ -0.65
RGPD1-205ENST00000641339 H7C1H1 209 aa11.01□□□□□ -0.65
RGPD1-205ENST00000641339 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
RGPD1-205ENST00000641339 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
RGPD1-205ENST00000641339 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
RGPD1-205ENST00000641339 V9GYV3 84 aa11.01□□□□□ -0.65
RGPD1-205ENST00000641339 FAM231BA6NCW3 169 aa11□□□□□ -0.65
RGPD1-205ENST00000641339 GATD1Q8NB37 220 aa11□□□□□ -0.65
RGPD1-205ENST00000641339 CHCHD7Q9BUK0 85 aa11□□□□□ -0.65
RGPD1-205ENST00000641339 NIT2Q9NQR4 276 aa11□□□□□ -0.65
RGPD1-205ENST00000641339 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
RGPD1-205ENST00000641339 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
RGPD1-205ENST00000641339 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
RGPD1-205ENST00000641339 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
RGPD1-205ENST00000641339 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
RGPD1-205ENST00000641339 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
RGPD1-205ENST00000641339 NAT8Q9UHE5 227 aa10.99□□□□□ -0.65
RGPD1-205ENST00000641339 KLK12Q9UKR0 248 aa10.99□□□□□ -0.65
RGPD1-205ENST00000641339 URGCP-MRPS24S4R325 110 aa10.99□□□□□ -0.65
RGPD1-205ENST00000641339 A0A087WX48 190 aa10.98□□□□□ -0.65
RGPD1-205ENST00000641339 TMEM262E9PQX1 116 aa10.98□□□□□ -0.65
RGPD1-205ENST00000641339 EREGO14944 169 aa10.98□□□□□ -0.65
RGPD1-205ENST00000641339 PSCAO43653 123 aa10.98□□□□□ -0.65
RGPD1-205ENST00000641339 TMEM97Q5BJF2 176 aa10.98□□□□□ -0.65
RGPD1-205ENST00000641339 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
RGPD1-205ENST00000641339 ADIRFQ15847 76 aa10.97□□□□□ -0.65
RGPD1-205ENST00000641339 IQCJQ1A5X6 159 aa10.97□□□□□ -0.65
RGPD1-205ENST00000641339 MPV17L2Q567V2 206 aa10.97□□□□□ -0.65
RGPD1-205ENST00000641339 C15orf54Q8N8G6 183 aa10.97□□□□□ -0.65
RGPD1-205ENST00000641339 A0A1B0GUT8 65 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 ENHOQ6UWT2 76 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 SMIM15Q7Z3B0 74 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 NUP35Q8NFH5 326 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 FRZBQ92765 325 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 CHCHD5Q9BSY4 110 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 TM2D2Q9BX73 214 aa10.96□□□□□ -0.65
RGPD1-205ENST00000641339 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 CDK2AP2O75956 126 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 WFDC2Q14508 124 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 ELOBQ15370 118 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 ATRAIDQ6UW56 229 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 Q8N976 141 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
RGPD1-205ENST00000641339 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
RGPD1-205ENST00000641339 IGHV1-24A0A0C4DH33 117 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 IFITM2Q01629 132 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 CDPF1Q6NVV7 123 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 KCNIP4Q6PIL6 250 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 BORCS7Q96B45 105 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 RNF185Q96GF1 192 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 TMEM191AQ9H0A3 160 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 ABCA13Q86UQ4 5058 aa10.94□□□□□ -0.66
RGPD1-205ENST00000641339 SMIM27A0A1W2PRY6 76 aa10.93□□□□□ -0.66
RGPD1-205ENST00000641339 RBX1P62877 108 aa10.93□□□□□ -0.66
RGPD1-205ENST00000641339 GAGE6Q13070 117 aa10.93□□□□□ -0.66
RGPD1-205ENST00000641339 Q8N814 137 aa10.93□□□□□ -0.66
RGPD1-205ENST00000641339 ANGP03950 147 aaKnown RBP10.92□□□□□ -0.66
RGPD1-205ENST00000641339 RAB4AP20338 218 aa10.92□□□□□ -0.66
RGPD1-205ENST00000641339 RAB14P61106 215 aa10.92□□□□□ -0.66
RGPD1-205ENST00000641339 PKIAP61925 76 aa10.92□□□□□ -0.66
RGPD1-205ENST00000641339 NAT8BQ9UHF3 227 aa10.92□□□□□ -0.66
RGPD1-205ENST00000641339 IGKV2D-24A0A075B6R9 120 aa10.91□□□□□ -0.66
RGPD1-205ENST00000641339 Q0VG73 95 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms