RNA–Protein interactions for RNA: ENST00000640646.1

PRICKLE1-218, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-218ENST00000640646 K7EN84 100 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 Q6ZSA8 131 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 FER1L6-AS1Q8NA97 138 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 NUDT10Q8NFP7 164 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 NUDT11Q96G61 164 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 FAM210AQ96ND0 272 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 GTSF1LQ9H1H1 148 aa9.59□□□□□ -0.87
PRICKLE1-218ENST00000640646 HMCN2Q8NDA2 5059 aa9.58□□□□□ -0.88
PRICKLE1-218ENST00000640646 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
PRICKLE1-218ENST00000640646 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
PRICKLE1-218ENST00000640646 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
PRICKLE1-218ENST00000640646 ZNF56Q15929 161 aa9.57□□□□□ -0.88
PRICKLE1-218ENST00000640646 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
PRICKLE1-218ENST00000640646 RAB4BP61018 213 aa9.56□□□□□ -0.88
PRICKLE1-218ENST00000640646 RPP21Q9H633 154 aaKnown RBP9.56□□□□□ -0.88
PRICKLE1-218ENST00000640646 F2Z2F3 143 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 F5H697 171 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 NDUFS6O75380 124 aaKnown RBP9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 SMIM17P0DL12 118 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 CACNG7P62955 275 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 LYZL1Q6UWQ5 148 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 AP1S3Q96PC3 154 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 SMIM7Q9BQ49 75 aa9.55□□□□□ -0.88
PRICKLE1-218ENST00000640646 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
PRICKLE1-218ENST00000640646 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
PRICKLE1-218ENST00000640646 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
PRICKLE1-218ENST00000640646 KIF25-AS1Q9Y6Z4 181 aa9.54□□□□□ -0.88
PRICKLE1-218ENST00000640646 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
PRICKLE1-218ENST00000640646 ZNF727A8MUV8 499 aa9.53□□□□□ -0.88
PRICKLE1-218ENST00000640646 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
PRICKLE1-218ENST00000640646 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
PRICKLE1-218ENST00000640646 TM2D2Q9BX73 214 aa9.53□□□□□ -0.88
PRICKLE1-218ENST00000640646 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
PRICKLE1-218ENST00000640646 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 C9JQL5 133 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 MGPP08493 103 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 NTF3P20783 257 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 FAM231DQ6ZW35 169 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 LINC01551Q86U37 167 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 NEXN-AS1Q8NBZ9 246 aa9.52□□□□□ -0.89
PRICKLE1-218ENST00000640646 A0A087WWC5 75 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 LECT2O14960 151 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 CTRLP40313 264 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 UBE2D3P61077 147 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 UBE2D2P62837 147 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
PRICKLE1-218ENST00000640646 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 TRGC1P0CF51 173 aa9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 KRTAP10-4P60372 401 aaPredicted RBP9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 PEA15Q15121 130 aa9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 TWIST1Q15672 202 aa9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
PRICKLE1-218ENST00000640646 A8MWL6 223 aa9.49□□□□□ -0.89
PRICKLE1-218ENST00000640646 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 LINC01620Q4KN68 170 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 FAM74A3Q4VXF1 159 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 NIT1Q86X76 327 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 BAALCQ8WXS3 180 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 PGLYRP4Q96LB8 373 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
PRICKLE1-218ENST00000640646 PKHD1L1Q86WI1 4243 aa9.47□□□□□ -0.89
PRICKLE1-218ENST00000640646 H7C1H1 209 aa9.47□□□□□ -0.89
PRICKLE1-218ENST00000640646 J3QL48 77 aa9.47□□□□□ -0.89
PRICKLE1-218ENST00000640646 M0QY20 66 aa9.47□□□□□ -0.89
PRICKLE1-218ENST00000640646 CT83Q5H943 113 aa9.47□□□□□ -0.89
PRICKLE1-218ENST00000640646 OSTCQ9NRP0 149 aa9.47□□□□□ -0.89
PRICKLE1-218ENST00000640646 RPL23P62829 140 aaKnown RBP9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 TSKUQ8WUA8 353 aa9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 ISOC2Q96AB3 205 aa9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 SMDT1Q9H4I9 107 aa9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 COX11Q9Y6N1 276 aa9.46□□□□□ -0.9
PRICKLE1-218ENST00000640646 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 FOXA3P55318 350 aaPredicted RBP9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 ADIRFQ15847 76 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 NAT8Q9UHE5 227 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 URGCP-MRPS24S4R325 110 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 UBR4Q5T4S7 5183 aa9.45□□□□□ -0.9
PRICKLE1-218ENST00000640646 HIGD1CA8MV81 97 aa9.44□□□□□ -0.9
PRICKLE1-218ENST00000640646 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
PRICKLE1-218ENST00000640646 RAB14P61106 215 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms