RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 C9JAW5 83 aa8.37□□□□□ -1.07
SCN1B-208ENST00000640135 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
SCN1B-208ENST00000640135 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
SCN1B-208ENST00000640135 RPL39LQ96EH5 51 aaKnown RBP8.37□□□□□ -1.07
SCN1B-208ENST00000640135 VSIG2Q96IQ7 327 aa8.37□□□□□ -1.07
SCN1B-208ENST00000640135 RPL18AQ02543 176 aaKnown RBP8.37□□□□□ -1.07
SCN1B-208ENST00000640135 H3BQ85 93 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 CCL25O15444 150 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 HIST2H2BCQ6DN03 193 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 ZNF702PQ9H963 129 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 PSMB8P28062 276 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 Q8N6K4 173 aa8.36□□□□□ -1.07
SCN1B-208ENST00000640135 RBX1P62877 108 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 ESM1Q9NQ30 184 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 EIF4EBP1Q13541 118 aaPredicted RBP8.35□□□□□ -1.07
SCN1B-208ENST00000640135 UBL5Q9BZL1 73 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 HIST1H4AP62805 103 aaKnown RBP8.35□□□□□ -1.07
SCN1B-208ENST00000640135 MSRB1Q9NZV6 116 aa8.35□□□□□ -1.07
SCN1B-208ENST00000640135 COL5A1P20908 1838 aaPredicted RBP8.35□□□□□ -1.07
SCN1B-208ENST00000640135 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 COX7B2Q8TF08 81 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 RNF183Q96D59 192 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 IGLL1P15814 213 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
SCN1B-208ENST00000640135 BRWD1-AS2P59051 145 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 UTF1Q5T230 341 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 SIGMAR1Q99720 223 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 DEFB4AO15263 64 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 KIR2DL5BQ8NHK3 375 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 KLK12Q9UKR0 248 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 FASNP49327 2511 aaKnown RBP8.34□□□□□ -1.07
SCN1B-208ENST00000640135 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 DKK2Q9UBU2 259 aa8.34□□□□□ -1.07
SCN1B-208ENST00000640135 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 BPTFQ12830 3046 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 FAM222AQ5U5X8 452 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 H0YGX0 51 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 CRIP3Q6Q6R5 217 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
SCN1B-208ENST00000640135 DEFB131BA0A096LNP1 70 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 NUP210LQ5VU65 1888 aa8.33□□□□□ -1.08
SCN1B-208ENST00000640135 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 H7C423 109 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 CEND1Q8N111 149 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 CITED1Q99966 193 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 KMT2EQ8IZD2 1858 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 C15orf53Q8NAA6 179 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 SORL1Q92673 2214 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 C20orf203Q8NBC4 194 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
SCN1B-208ENST00000640135 TOMM6Q96B49 74 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 TRAV10A0A0B4J240 114 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 GTSF1LQ9H1H1 148 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 PIEZO2Q9H5I5 2752 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 PRR14LQ5THK1 2151 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 SPTBN4Q9H254 2564 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 TRAV26-1A0A087WT03 109 aa8.31□□□□□ -1.08
SCN1B-208ENST00000640135 C9orf118A6NHY6 69 aa8.3□□□□□ -1.08
SCN1B-208ENST00000640135 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
SCN1B-208ENST00000640135 ASPHD1Q5U4P2 390 aa8.3□□□□□ -1.08
SCN1B-208ENST00000640135 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
SCN1B-208ENST00000640135 Q6ZPA2 131 aa8.3□□□□□ -1.08
SCN1B-208ENST00000640135 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 CFC1P0CG37 223 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 DEFB1P60022 68 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 Q6ZTI0 123 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
SCN1B-208ENST00000640135 ZFAND6Q6FIF0 208 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
SCN1B-208ENST00000640135 MYO9AB2RTY4 2548 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 CEP295Q9C0D2 2601 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 CDSNQ15517 529 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 ORMDL1Q9P0S3 153 aa8.29□□□□□ -1.08
SCN1B-208ENST00000640135 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
SCN1B-208ENST00000640135 FUSP35637 526 aaKnown RBP eCLIP8.28□□□□□ -1.08
SCN1B-208ENST00000640135 UBE2AP49459 152 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 ZNF462Q96JM2 2506 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 TRBV6-4A0A1B0GX49 114 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 OPRPNQ99935 248 aaPredicted RBP8.28□□□□□ -1.08
SCN1B-208ENST00000640135 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 LRP4O75096 1905 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 ZNF580Q9UK33 172 aa8.28□□□□□ -1.08
SCN1B-208ENST00000640135 F8W1H4 67 aa8.27□□□□□ -1.08
SCN1B-208ENST00000640135 CRYBA4P53673 196 aa8.27□□□□□ -1.08
SCN1B-208ENST00000640135 NFE4Q86UQ8 179 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms