RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 ZNF469Q96JG9 3925 aaPredicted RBP9.4□□□□□ -0.9
SPIN3-236ENST00000640131 BBC3Q96PG8 261 aaPredicted RBP9.4□□□□□ -0.9
SPIN3-236ENST00000640131 TRGV3P03979 118 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 RPL35AP18077 110 aaKnown RBP9.39□□□□□ -0.91
SPIN3-236ENST00000640131 MALP21145 153 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 CKS2P33552 79 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 MRPL51Q4U2R6 128 aaKnown RBP9.39□□□□□ -0.91
SPIN3-236ENST00000640131 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 OVOL1O14753 267 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 SH2D1AO60880 128 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 OXTP01178 125 aa9.39□□□□□ -0.91
SPIN3-236ENST00000640131 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
SPIN3-236ENST00000640131 H3BMM0 161 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 JPT2Q9H910 190 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 RS1O15537 224 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 KLK15Q9H2R5 256 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
SPIN3-236ENST00000640131 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
SPIN3-236ENST00000640131 COX7CP15954 63 aa9.37□□□□□ -0.91
SPIN3-236ENST00000640131 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
SPIN3-236ENST00000640131 hADV29S1A0JD25 119 aa9.37□□□□□ -0.91
SPIN3-236ENST00000640131 CLPSL1A2RUU4 121 aa9.37□□□□□ -0.91
SPIN3-236ENST00000640131 UNQ9165/PRO28630Q6UXU0 137 aa9.37□□□□□ -0.91
SPIN3-236ENST00000640131 EEF1AKMT3Q96AZ1 226 aa9.37□□□□□ -0.91
SPIN3-236ENST00000640131 SPRY2O43597 315 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 BUB3O43684 328 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 TRACP01848 142 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 CRYGAP11844 174 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 RPL11P62913 178 aaKnown RBP9.36□□□□□ -0.91
SPIN3-236ENST00000640131 IL17RELQ6ZVW7 336 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 PRR25Q96S07 402 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 MSRB1Q9NZV6 116 aa9.36□□□□□ -0.91
SPIN3-236ENST00000640131 NF1P21359 2839 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 IMUPQ9GZP8 106 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 NXT2Q9NPJ8 142 aaKnown RBP9.35□□□□□ -0.91
SPIN3-236ENST00000640131 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 MSMBP08118 114 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 PDE6HQ13956 83 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 V9GYY9 64 aa9.35□□□□□ -0.91
SPIN3-236ENST00000640131 PRRC2AP48634 2157 aaKnown RBP9.34□□□□□ -0.91
SPIN3-236ENST00000640131 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 CFC1BP0CG36 223 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 CFC1P0CG37 223 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 PLNP26678 52 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 ZNF415Q09FC8 603 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 PLEKHB2Q96CS7 222 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 ACANP16112 2415 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 HIST2H2BDQ6DRA6 164 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 METTL26Q96S19 204 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 PRO1854Q9UHT4 67 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 PYGO1Q9Y3Y4 419 aa9.34□□□□□ -0.91
SPIN3-236ENST00000640131 UBR5O95071 2799 aaPredicted RBP9.33□□□□□ -0.92
SPIN3-236ENST00000640131 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
SPIN3-236ENST00000640131 APCP25054 2843 aa9.33□□□□□ -0.92
SPIN3-236ENST00000640131 IGF1P05019 195 aa9.33□□□□□ -0.92
SPIN3-236ENST00000640131 KRTAP10-9P60411 292 aa9.33□□□□□ -0.92
SPIN3-236ENST00000640131 TMEM258P61165 79 aa9.33□□□□□ -0.92
SPIN3-236ENST00000640131 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
SPIN3-236ENST00000640131 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 HERVK_113P61574 105 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 MYOZ3Q8TDC0 251 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 IGHV4-59P01825 116 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 ATP5G1P05496 136 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
SPIN3-236ENST00000640131 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 CYSTM1Q9H1C7 97 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 CHD6Q8TD26 2715 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 F6UB75 175 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 ATXN8Q156A1 80 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 AGPAT4-IT1Q9H0P7 198 aa9.32□□□□□ -0.92
SPIN3-236ENST00000640131 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
SPIN3-236ENST00000640131 H7C2G1 150 aa9.31□□□□□ -0.92
SPIN3-236ENST00000640131 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
SPIN3-236ENST00000640131 NOTCH3Q9UM47 2321 aa9.31□□□□□ -0.92
SPIN3-236ENST00000640131 C2orf48Q96LS8 159 aa9.31□□□□□ -0.92
SPIN3-236ENST00000640131 TRBV7-1A0A0A6YYK4 115 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 Q8N8P6 123 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 C20orf173Q96LM9 149 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 C11orf21Q9P2W6 132 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 ITPR3Q14573 2671 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 MTORP42345 2549 aa9.3□□□□□ -0.92
SPIN3-236ENST00000640131 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
SPIN3-236ENST00000640131 LINC01546A6NGU7 62 aa9.29□□□□□ -0.92
SPIN3-236ENST00000640131 DEFB112Q30KQ8 113 aa9.29□□□□□ -0.92
SPIN3-236ENST00000640131 TMEM86BQ8N661 226 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms