RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 H3BQ85 93 aa14.09□□□□□ -0.15
SCARB2-213ENST00000638680 C14orf132Q9NPU4 83 aa14.09□□□□□ -0.15
SCARB2-213ENST00000638680 ABCA4P78363 2273 aa14.09□□□□□ -0.15
SCARB2-213ENST00000638680 SPART-AS1P0CW21 52 aa14.08□□□□□ -0.15
SCARB2-213ENST00000638680 TIRAPP58753 221 aa14.08□□□□□ -0.16
SCARB2-213ENST00000638680 C10orf105Q8TEF2 133 aa14.08□□□□□ -0.16
SCARB2-213ENST00000638680 PROP1O75360 226 aa14.08□□□□□ -0.16
SCARB2-213ENST00000638680 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
SCARB2-213ENST00000638680 RIF1Q5UIP0 2472 aaKnown RBP14.08□□□□□ -0.16
SCARB2-213ENST00000638680 NDUFC2O95298 119 aa14.08□□□□□ -0.16
SCARB2-213ENST00000638680 MT-ATP8P03928 68 aa14.08□□□□□ -0.16
SCARB2-213ENST00000638680 C9orf66Q5T8R8 295 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 CRIP3Q6Q6R5 217 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 MP68P56378 58 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 NDUFA1O15239 70 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 YPEL4Q96NS1 127 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 A0A0J9YXY3 114 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 WISP2O76076 250 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 ADORA2A-AS1P86434 159 aa14.07□□□□□ -0.16
SCARB2-213ENST00000638680 A0A0J9YX75 114 aa14.06□□□□□ -0.16
SCARB2-213ENST00000638680 MLST8Q9BVC4 326 aa14.06□□□□□ -0.16
SCARB2-213ENST00000638680 SIRPDQ9H106 197 aa14.06□□□□□ -0.16
SCARB2-213ENST00000638680 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
SCARB2-213ENST00000638680 TP53TG3Q9ULZ0 132 aa14.06□□□□□ -0.16
SCARB2-213ENST00000638680 TMEM256-PLSCR3K7ERE1 68 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 IGLC6P0CF74 106 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 P0DMU3 169 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 FAM231AP0DMU4 169 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 FAM231CP0DMU5 169 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 DEFB113Q30KQ7 82 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 CCDC140Q96MF4 163 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 LINC00643Q86TS7 51 aa14.05□□□□□ -0.16
SCARB2-213ENST00000638680 SPANXB1Q9NS25 103 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-213ENST00000638680 PCNX1Q96RV3 2341 aa14.04□□□□□ -0.16
SCARB2-213ENST00000638680 CXCL5P42830 114 aa14.04□□□□□ -0.16
SCARB2-213ENST00000638680 ZMAT4Q9H898 229 aa14.04□□□□□ -0.16
SCARB2-213ENST00000638680 A0A1W2PNU3 283 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-213ENST00000638680 DIRC1Q969H9 104 aa14.04□□□□□ -0.16
SCARB2-213ENST00000638680 NBASA2RRP1 2371 aa14.04□□□□□ -0.16
SCARB2-213ENST00000638680 KIF26AQ9ULI4 1882 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-213ENST00000638680 TEX49A0A1B0GTD5 131 aa14.04□□□□□ -0.16
SCARB2-213ENST00000638680 CLPSL1A2RUU4 121 aa14.03□□□□□ -0.16
SCARB2-213ENST00000638680 SPAG11BQ08648 103 aa14.03□□□□□ -0.16
SCARB2-213ENST00000638680 NEXN-AS1Q8NBZ9 246 aa14.03□□□□□ -0.16
SCARB2-213ENST00000638680 MBD6Q96DN6 1003 aa14.03□□□□□ -0.16
SCARB2-213ENST00000638680 NRGNQ92686 78 aa14.03□□□□□ -0.16
SCARB2-213ENST00000638680 NDUFV3P56181 108 aaKnown RBP14.03□□□□□ -0.16
SCARB2-213ENST00000638680 IGKV2D-26A0A0A0MRZ7 120 aa14.03□□□□□ -0.16
SCARB2-213ENST00000638680 DEFB4AO15263 64 aa14.02□□□□□ -0.17
SCARB2-213ENST00000638680 CHKB-CPT1BH3BT56 60 aa14.02□□□□□ -0.17
SCARB2-213ENST00000638680 HIGD2BQ4VC39 106 aa14.02□□□□□ -0.17
SCARB2-213ENST00000638680 TM2D2Q9BX73 214 aa14.02□□□□□ -0.17
SCARB2-213ENST00000638680 EIF4EBP1Q13541 118 aaPredicted RBP14.01□□□□□ -0.17
SCARB2-213ENST00000638680 IGF2-ASQ6U949 168 aa14.01□□□□□ -0.17
SCARB2-213ENST00000638680 C4orf3Q8WVX3 66 aa14.01□□□□□ -0.17
SCARB2-213ENST00000638680 NDUFB1O75438 58 aa14.01□□□□□ -0.17
SCARB2-213ENST00000638680 J3QKU1 62 aa14□□□□□ -0.17
SCARB2-213ENST00000638680 SPRY4Q9C004 299 aa14□□□□□ -0.17
SCARB2-213ENST00000638680 CREBBPQ92793 2442 aa14□□□□□ -0.17
SCARB2-213ENST00000638680 TRAV23DV6A0A075B6W5 121 aa14□□□□□ -0.17
SCARB2-213ENST00000638680 MAPKAPK5-AS1Q8N8E1 139 aa14□□□□□ -0.17
SCARB2-213ENST00000638680 TMEM89A2RUT3 159 aa13.99□□□□□ -0.17
SCARB2-213ENST00000638680 LINC00574Q9H8X3 128 aa13.99□□□□□ -0.17
SCARB2-213ENST00000638680 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
SCARB2-213ENST00000638680 TMEM263Q8WUH6 116 aaKnown RBP13.99□□□□□ -0.17
SCARB2-213ENST00000638680 KLK12Q9UKR0 248 aa13.99□□□□□ -0.17
SCARB2-213ENST00000638680 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.172e-8■■■□□ 17.7
SCARB2-213ENST00000638680 HIST2H2BDQ6DRA6 164 aa13.98□□□□□ -0.17
SCARB2-213ENST00000638680 A6NDX4 124 aa13.98□□□□□ -0.17
SCARB2-213ENST00000638680 CCL18P55774 89 aa13.98□□□□□ -0.17
SCARB2-213ENST00000638680 UPK3BQ9BT76 320 aa13.98□□□□□ -0.17
SCARB2-213ENST00000638680 DEFB135Q30KP9 77 aa13.97□□□□□ -0.17
SCARB2-213ENST00000638680 MAP6D1Q9H9H5 199 aa13.97□□□□□ -0.17
SCARB2-213ENST00000638680 SPATA25Q9BR10 227 aa13.97□□□□□ -0.17
SCARB2-213ENST00000638680 SDIM1Q6ZPB5 146 aa13.97□□□□□ -0.17
SCARB2-213ENST00000638680 ODF3BA8MYP8 253 aa13.96□□□□□ -0.17
SCARB2-213ENST00000638680 IGF1P05019 195 aa13.96□□□□□ -0.17
SCARB2-213ENST00000638680 CRIP1P50238 77 aa13.96□□□□□ -0.17
SCARB2-213ENST00000638680 TMEM223A0PJW6 202 aa13.96□□□□□ -0.17
SCARB2-213ENST00000638680 F8W735 103 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-213ENST00000638680 NACAE9PAV3 2078 aa13.96□□□□□ -0.18
SCARB2-213ENST00000638680 C20orf173Q96LM9 149 aa13.96□□□□□ -0.18
SCARB2-213ENST00000638680 ZGRF1Q86YA3 2104 aa13.96□□□□□ -0.18
SCARB2-213ENST00000638680 TRBV10-1A0A0K0K1A3 114 aa13.95□□□□□ -0.18
SCARB2-213ENST00000638680 COX7BP24311 80 aa13.95□□□□□ -0.18
SCARB2-213ENST00000638680 LINC00467Q9BRT7 94 aa13.95□□□□□ -0.18
SCARB2-213ENST00000638680 WFDC11Q8NEX6 87 aa13.95□□□□□ -0.18
SCARB2-213ENST00000638680 MED13LQ71F56 2210 aa13.94□□□□□ -0.18
SCARB2-213ENST00000638680 UBE2AP49459 152 aa13.94□□□□□ -0.18
SCARB2-213ENST00000638680 U3KQK5 164 aa13.94□□□□□ -0.18
SCARB2-213ENST00000638680 ZNF22P17026 224 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-213ENST00000638680 BRK1Q8WUW1 75 aa13.94□□□□□ -0.18
SCARB2-213ENST00000638680 PKIGQ9Y2B9 76 aa13.94□□□□□ -0.18
SCARB2-213ENST00000638680 ZFAND2AQ8N6M9 145 aa13.93□□□□□ -0.18
SCARB2-213ENST00000638680 RBX1P62877 108 aa13.93□□□□□ -0.18
SCARB2-213ENST00000638680 RNF185Q96GF1 192 aa13.93□□□□□ -0.18
SCARB2-213ENST00000638680 PDE6GP18545 87 aa13.93□□□□□ -0.18
SCARB2-213ENST00000638680 DAZAP2Q15038 168 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-213ENST00000638680 FAM110AQ9BQ89 295 aa13.92□□□□□ -0.18
SCARB2-213ENST00000638680 CDKN2A-AS1Q9UH64 79 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms