RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IGHV3-30P01768 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-33P01772 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-30-3P0DP02 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 IGHV3-30-5P0DP03 117 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 ADIRFQ15847 76 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 LINC01556Q5JQF7 62 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 NAT8Q9UHE5 227 aa14.71□□□□□ -0.05
SCN1B-206ENST00000638536 DNAH5Q8TE73 4624 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 TRGC1P0CF51 173 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 RAB14P61106 215 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 TSKUQ8WUA8 353 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 DPH3P1Q9H4G8 78 aa14.7□□□□□ -0.06
SCN1B-206ENST00000638536 HIGD1CA8MV81 97 aa14.69□□□□□ -0.06
SCN1B-206ENST00000638536 TRAV9-2A0A087WT02 112 aa14.68□□□□□ -0.06
SCN1B-206ENST00000638536 CLLU1Q5K131 121 aa14.68□□□□□ -0.06
SCN1B-206ENST00000638536 BTF3P20290 206 aaKnown RBP14.66□□□□□ -0.06
SCN1B-206ENST00000638536 A0A087WWC5 75 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 TRAV26-2A0A0B4J265 109 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 C15orf54Q8N8G6 183 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 GFRA4Q9GZZ7 299 aa14.66□□□□□ -0.06
SCN1B-206ENST00000638536 LRP1BQ9NZR2 4599 aa14.65□□□□□ -0.06
SCN1B-206ENST00000638536 K7EP13 123 aa14.65□□□□□ -0.06
SCN1B-206ENST00000638536 NTM-AS1Q6ZSK4 140 aa14.65□□□□□ -0.06
SCN1B-206ENST00000638536 DAZ4Q86SG3 579 aaKnown RBP14.65□□□□□ -0.06
SCN1B-206ENST00000638536 DAZ3Q9NR90 486 aaKnown RBP14.65□□□□□ -0.06
SCN1B-206ENST00000638536 KIAA1109Q2LD37 5005 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 ATP6V1G1O75348 118 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 NIT1Q86X76 327 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 NUP35Q8NFH5 326 aa14.64□□□□□ -0.07
SCN1B-206ENST00000638536 TRBV6-8A0A0A6YYG3 113 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 IBA57-AS1B1ANH7 110 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 RASL11AQ6T310 242 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 C10orf126Q8N4M7 172 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 GATD1Q8NB37 220 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 DEFB104AQ8WTQ1 72 aa14.63□□□□□ -0.07
SCN1B-206ENST00000638536 A0A1B0GUT8 65 aa14.62□□□□□ -0.07
SCN1B-206ENST00000638536 H7C1H1 209 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 DNAJC30Q96LL9 226 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 Q9HAA7 133 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 NIT2Q9NQR4 276 aa14.61□□□□□ -0.07
SCN1B-206ENST00000638536 GAS8-AS1O95177 125 aa14.6□□□□□ -0.07
SCN1B-206ENST00000638536 SMIM27A0A1W2PRY6 76 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 NDUFA5Q16718 116 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 RPL39LQ96EH5 51 aaKnown RBP14.59□□□□□ -0.07
SCN1B-206ENST00000638536 NFE4Q86UQ8 179 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 BORCS7Q96B45 105 aa14.59□□□□□ -0.07
SCN1B-206ENST00000638536 KRTAP10-2P60368 255 aa14.58□□□□□ -0.08
SCN1B-206ENST00000638536 SMIM15Q7Z3B0 74 aa14.58□□□□□ -0.08
SCN1B-206ENST00000638536 NAT8BQ9UHF3 227 aa14.58□□□□□ -0.08
SCN1B-206ENST00000638536 FUSP35637 526 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCN1B-206ENST00000638536 RNF185Q96GF1 192 aa14.57□□□□□ -0.08
SCN1B-206ENST00000638536 TMEM191AQ9H0A3 160 aa14.56□□□□□ -0.08
SCN1B-206ENST00000638536 TMEM262E9PQX1 116 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 MPV17L2Q567V2 206 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 SPATA12Q7Z6I5 190 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 AMN1Q8IY45 258 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 KLK12Q9UKR0 248 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.55□□□□□ -0.08
SCN1B-206ENST00000638536 CHCHD5Q9BSY4 110 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 URGCP-MRPS24S4R325 110 aa14.55□□□□□ -0.08
SCN1B-206ENST00000638536 A0A087WX48 190 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 ADCYAP1P18509 176 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 RAB4AP20338 218 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 RIGQ13278 110 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 LAGE3Q14657 143 aa14.54□□□□□ -0.08
SCN1B-206ENST00000638536 A0A087WTM6 91 aa14.53□□□□□ -0.08
SCN1B-206ENST00000638536 Q8N976 141 aa14.53□□□□□ -0.08
SCN1B-206ENST00000638536 HERC2O95714 4834 aa14.52□□□□□ -0.08
SCN1B-206ENST00000638536 GAGE6Q13070 117 aa14.52□□□□□ -0.08
SCN1B-206ENST00000638536 IQCJQ1A5X6 159 aa14.52□□□□□ -0.08
SCN1B-206ENST00000638536 TRBV25-1A0A075B6N4 114 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 RPS10P46783 165 aaKnown RBP14.52□□□□□ -0.09
SCN1B-206ENST00000638536 TMEM97Q5BJF2 176 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 ATRAIDQ6UW56 229 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 FRZBQ92765 325 aa14.52□□□□□ -0.09
SCN1B-206ENST00000638536 IGHV1-24A0A0C4DH33 117 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 SMKR1H3BMG3 65 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 CAMPP49913 170 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 CHCHD7Q9BUK0 85 aa14.51□□□□□ -0.09
SCN1B-206ENST00000638536 RYR1P21817 5038 aa14.5□□□□□ -0.09
SCN1B-206ENST00000638536 LRCOL1A6NCL2 159 aa14.5□□□□□ -0.09
SCN1B-206ENST00000638536 MRPL54Q6P161 138 aaKnown RBP14.5□□□□□ -0.09
SCN1B-206ENST00000638536 MAPKAPK5-AS1Q8N8E1 139 aa14.5□□□□□ -0.09
SCN1B-206ENST00000638536 APOBP04114 4563 aaKnown RBP14.5□□□□□ -0.09
SCN1B-206ENST00000638536 PSCAO43653 123 aa14.49□□□□□ -0.09
SCN1B-206ENST00000638536 PNRC1Q12796 327 aaPredicted RBP14.49□□□□□ -0.09
SCN1B-206ENST00000638536 UBE2WQ96B02 151 aa14.49□□□□□ -0.09
SCN1B-206ENST00000638536 TRAV8-3A0A0A6YYJ7 113 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 TMEM218A2RU14 115 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 SDHAF1A6NFY7 115 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 C16orf90A8MZG2 172 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 NCR2O95944 276 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 RBX1P62877 108 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 KCNIP4Q6PIL6 250 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 UQCC3Q6UW78 93 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 ENHOQ6UWT2 76 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 S100A1P23297 94 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 WFDC2Q14508 124 aa14.48□□□□□ -0.09
SCN1B-206ENST00000638536 COMMD7Q86VX2 200 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms