RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 UBR1Q8IWV7 1749 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 CRYBG1Q9Y4K1 1723 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 PDCD11Q14690 1871 aaKnown RBP1.96□□□□□ -2.1
VIM-210ENST00000637053 TANC1Q9C0D5 1861 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 EFCAB6Q5THR3 1501 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 ZMYM4Q5VZL5 1548 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 USP54Q70EL1 1684 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 PREX1Q8TCU6 1659 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 PCNX2A6NKB5 2137 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 KIAA2026Q5HYC2 2103 aa1.96□□□□□ -2.1
VIM-210ENST00000637053 ABCA5Q8WWZ7 1642 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 PLXNA1Q9UIW2 1896 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 MAST1Q9Y2H9 1570 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 TMSB15BA0A087X1C1 80 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 TEX49A0A1B0GTD5 131 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 TMEM30CPA0ZSE6 113 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 SDHAF1A6NFY7 115 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 CEBPZOSA8MTT3 80 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 CHKB-CPT1BH3BT56 60 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 HCRTO43612 131 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 IGLV1-44P01699 117 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 TFF1P04155 84 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 COX6CP09669 75 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 EDDM3BP56851 147 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 PLGLAQ15195 96 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 Q1RN00 199 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 Q6JHZ5 121 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 ZNF818PQ6ZRF7 136 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 NDUFA11Q86Y39 141 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 C20orf166-AS1Q96NR2 134 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 LIMD2Q9BT23 127 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 PROK2Q9HC23 129 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 TMEM14AQ9Y6G1 99 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 S4R3C0 116 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 COL4A6Q14031 1691 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 ALS2Q96Q42 1657 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 LRP4O75096 1905 aa1.95□□□□□ -2.1
VIM-210ENST00000637053 COL16A1Q07092 1604 aaPredicted RBP1.95□□□□□ -2.1
VIM-210ENST00000637053 MED13Q9UHV7 2174 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 IGHV1-18A0A0C4DH31 117 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 CXorf51AA0A1B0GTR3 108 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 C11orf86A6NJI1 115 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 A8MU10 97 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 TMEM14DPA8MWL7 114 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 H3BQ85 93 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 H3BVH4 76 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 PANO1I0J062 215 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 LINC01565O15544 149 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 IGKV3-11P04433 115 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 IFI27P40305 119 aaPredicted RBP1.94□□□□□ -2.1
VIM-210ENST00000637053 C10orf128Q5T292 105 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 SPANXA2-OT1Q8N9U9 137 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 KLF14Q8TD94 323 aaPredicted RBP1.94□□□□□ -2.1
VIM-210ENST00000637053 PSENENQ9NZ42 101 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 NFAT5O94916 1531 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 AGLP35573 1532 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 TRPM7Q96QT4 1865 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 NACAE9PAV3 2078 aa1.94□□□□□ -2.1
VIM-210ENST00000637053 NWD1Q149M9 1564 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 CDC42BPGQ6DT37 1551 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 MUC4Q99102 2169 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 GREB1Q4ZG55 1949 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 PLXNA2O75051 1894 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 NYNRINQ9P2P1 1898 aaKnown RBP1.93□□□□□ -2.1
VIM-210ENST00000637053 DIDO1Q9BTC0 2240 aaKnown RBP1.93□□□□□ -2.1
VIM-210ENST00000637053 IGLV10-54A0A075B6I4 117 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 IGLV3-16A0A075B6K0 115 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 A0A1B0GUV1 79 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 A0A1W2PPR1 153 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 ZNF815PA8K554 130 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 C10orf142B7Z368 130 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 ERC2-IT1O76042 136 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 IGHV3-53P01767 116 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 BAALC-AS2P0C853 105 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 P0C880 135 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 NCBP2-AS2Q69YL0 99 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 Q6ZR03 302 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 Q6ZR54 194 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 PPP1R1CQ8WVI7 109 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 LITAFQ99732 161 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 TMEM14BQ9NUH8 114 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 UBE2D4Q9Y2X8 147 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 AGRNO00468 2067 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 LTBP2Q14767 1821 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 CABIN1Q9Y6J0 2220 aa1.93□□□□□ -2.1
VIM-210ENST00000637053 SLIT2O94813 1529 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 LRP5O75197 1615 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 LTBP4Q8N2S1 1624 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 SLX4Q8IY92 1834 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 LCTP09848 1927 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 IGKV3D-11A0A0A0MRZ8 115 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 TRAV10A0A0B4J240 114 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 TRAV12-3A0A0B4J271 114 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 IGLV2-11P01706 119 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 SPINT3P49223 89 aa1.92□□□□□ -2.1
VIM-210ENST00000637053 EIF4EBP1Q13541 118 aaPredicted RBP1.92□□□□□ -2.1
VIM-210ENST00000637053 ATXN8Q156A1 80 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms