RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	GPHB5	Q86YW7	130 aa		10.93	□□□□□ -0.66
NEDD4L-238	ENST00000635997		Q8N1Y9	231 aa		10.93	□□□□□ -0.66
NEDD4L-238	ENST00000635997	STAB1	Q9NY15	2570 aa		10.93	□□□□□ -0.66
NEDD4L-238	ENST00000635997	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997		Q6ZQT7	251 aa		10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997	CRYBA4	P53673	196 aa		10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997	GATD1	Q8NB37	220 aa		10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997	ZNF503	Q96F45	646 aa		10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997		Q9HAA7	133 aa		10.92	□□□□□ -0.66
NEDD4L-238	ENST00000635997	PLEKHB2	Q96CS7	222 aa		10.91	□□□□□ -0.66
NEDD4L-238	ENST00000635997	CTRL	P40313	264 aa		10.91	□□□□□ -0.66
NEDD4L-238	ENST00000635997	GAGE2B	Q13066	116 aa		10.91	□□□□□ -0.66
NEDD4L-238	ENST00000635997	GAGE2E	Q4V326	116 aa		10.91	□□□□□ -0.66
NEDD4L-238	ENST00000635997	GAGE2D	Q9UEU5	116 aa		10.91	□□□□□ -0.66
NEDD4L-238	ENST00000635997	ERG28	Q9UKR5	140 aa		10.9	□□□□□ -0.66
NEDD4L-238	ENST00000635997	C4orf3	Q8WVX3	66 aa		10.9	□□□□□ -0.66
NEDD4L-238	ENST00000635997	GTSF1	Q8WW33	167 aa		10.9	□□□□□ -0.66
NEDD4L-238	ENST00000635997		B5MCH6	92 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	KLF5	Q13887	457 aa	Predicted RBP	10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	PMVK	Q15126	192 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	DKK2	Q9UBU2	259 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	IGHG4	P01861	327 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	LENEP	Q9Y5L5	61 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	IGLV10-54	A0A075B6I4	117 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	INS-IGF2	F8WCM5	200 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	MDFIC	Q9P1T7	246 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	ATG2A	Q2TAZ0	1938 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	PTPRB	P23467	1997 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997		K7EMI3	77 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	CDH23	Q9H251	3354 aa		10.89	□□□□□ -0.67
NEDD4L-238	ENST00000635997	EXPH5	Q8NEV8	1989 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997	CITED1	Q99966	193 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997	ZNF561-AS1	K7EIQ3	104 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997		K7EMT4	169 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SLC25A20	O43772	301 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997	XCL1	P47992	114 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997	WFDC2	Q14508	124 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SPATA25	Q9BR10	227 aa		10.88	□□□□□ -0.67
NEDD4L-238	ENST00000635997		H3BMM0	161 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	IGF1	P05019	195 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	UBE2W	Q96B02	151 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	LINC01559	Q495D7	138 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	MYMX	A0A1B0GTQ4	84 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	LY6L	H3BQJ8	138 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	PCP2	Q8IVA1	136 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	C5orf38	Q86SI9	138 aa		10.87	□□□□□ -0.67
NEDD4L-238	ENST00000635997	RBAKDN	A6NC62	111 aa		10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	IGLL5	B9A064	214 aa		10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	GYPE	P15421	78 aa		10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	GCN1	Q92616	2671 aa	Known RBP	10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	FSTL3	O95633	263 aa		10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	ZNF80	P51504	273 aa	Predicted RBP	10.86	□□□□□ -0.67
NEDD4L-238	ENST00000635997	TMEM89	A2RUT3	159 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SPART-AS1	P0CW21	52 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SPATA12	Q7Z6I5	190 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SCRT2	Q9NQ03	307 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	PGPEP1	Q9NXJ5	209 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	CCL18	P55774	89 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	RHOH	Q15669	191 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	FLNA	P21333	2647 aa	Known RBP	10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	RNF183	Q96D59	192 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997	PRSS29P	A6NIE9	313 aa		10.85	□□□□□ -0.67
NEDD4L-238	ENST00000635997		F8W1H4	67 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SUMO4	Q6EEV6	95 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997		A0A0J9YX75	114 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	NDUFA7	O95182	113 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	SMIM20	Q8N5G0	67 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	DSP	P15924	2871 aa	Known RBP	10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997		F8VRH5	84 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	LINC00310	P59036	64 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	KRTAP24-1	Q3LI83	254 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	C18orf65	Q6ZTR6	163 aa		10.84	□□□□□ -0.67
NEDD4L-238	ENST00000635997	NDUFA12	Q9UI09	145 aa		10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	VPS13A	Q96RL7	3174 aa		10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	IGKV2D-24	A0A075B6R9	120 aa		10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	CRYGB	P07316	175 aa		10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	RPL39	P62891	51 aa	Known RBP	10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	TSPAN13	O95857	204 aa		10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	LINC00482	Q8N8I6	264 aa		10.83	□□□□□ -0.68
NEDD4L-238	ENST00000635997	C9orf47	Q6ZRZ4	202 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	COL4A2	P08572	1712 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	EBI3	Q14213	229 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	TTTY13	Q9BZ97	58 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	KLF12	Q9Y4X4	402 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	C20orf78	Q9BR46	151 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	ZNF747	Q9BV97	191 aa		10.82	□□□□□ -0.68
NEDD4L-238	ENST00000635997	MAP6D1	Q9H9H5	199 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	ZNF493	Q6ZR52	646 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	TRBV20-1	A0A075B6N2	111 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	IGHV3-30	P01768	117 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	IGHV3-33	P01772	117 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	ATP5G1	P05496	136 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	IGHV3-30-3	P0DP02	117 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	IGHV3-30-5	P0DP03	117 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	C10orf126	Q8N4M7	172 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997	TMEM141	Q96I45	108 aa		10.81	□□□□□ -0.68
NEDD4L-238	ENST00000635997		A0A0J9YXV3	536 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms