RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 KIF25-AS1Q9Y6Z4 181 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 DNAH6Q9C0G6 4158 aa6.68□□□□□ -1.34
LINC00339-210ENST00000635675 TRBV24-1A0A075B6N3 115 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 NBDYA0A0U1RRE5 68 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
LINC00339-210ENST00000635675 TIRAPP58753 221 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 LINC00315P59091 139 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 LINC00694P0DN24 101 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 NTF3P20783 257 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 GFRA4Q9GZZ7 299 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 TRAPPC1Q9Y5R8 145 aa6.67□□□□□ -1.34
LINC00339-210ENST00000635675 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 TRBV10-1A0A0K0K1A3 114 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 TRGC2P03986 189 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 EVI2AP22794 236 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 FABP9Q0Z7S8 132 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 GAGE1Q13065 139 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 GAGE4Q13068 117 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 GAGE5Q13069 117 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 RIGQ13278 110 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 TWIST1Q15672 202 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 ATP6V0E2Q8NHE4 81 aa6.66□□□□□ -1.34
LINC00339-210ENST00000635675 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
LINC00339-210ENST00000635675 A0A1B0GUT8 65 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 FAM231BA6NCW3 169 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 C1orf196B1AJZ1 125 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 SIVA1O15304 175 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 SMIM17P0DL12 118 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 HBBP68871 147 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 ZNF56Q15929 161 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 KIAA1644Q3SXP7 199 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 TMEM136Q6ZRR5 245 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 GTSF1LQ9H1H1 148 aa6.65□□□□□ -1.35
LINC00339-210ENST00000635675 TRBV7-3A0A075B6L6 115 aa6.64□□□□□ -1.35
LINC00339-210ENST00000635675 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
LINC00339-210ENST00000635675 F5H697 171 aa6.64□□□□□ -1.35
LINC00339-210ENST00000635675 RTL8CO15255 209 aa6.64□□□□□ -1.35
LINC00339-210ENST00000635675 TRGC1P0CF51 173 aa6.64□□□□□ -1.35
LINC00339-210ENST00000635675 WFDC10BQ8IUB3 73 aa6.64□□□□□ -1.35
LINC00339-210ENST00000635675 M0QY20 66 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 DNAH10OSP0CZ25 163 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 RAB5BP61020 215 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 UBE2D3P61077 147 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 UBE2D2P62837 147 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 RPL36AP83881 106 aaKnown RBP6.63□□□□□ -1.35
LINC00339-210ENST00000635675 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 LELP1Q5T871 98 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 ATP5L2Q7Z4Y8 100 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 NEXN-AS1Q8NBZ9 246 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 RPL36ALQ969Q0 106 aaKnown RBP6.63□□□□□ -1.35
LINC00339-210ENST00000635675 DPH3P1Q9H4G8 78 aa6.63□□□□□ -1.35
LINC00339-210ENST00000635675 APCSP02743 223 aa6.62□□□□□ -1.35
LINC00339-210ENST00000635675 MGPP08493 103 aa6.62□□□□□ -1.35
LINC00339-210ENST00000635675 C1orf134Q5TEV5 83 aa6.62□□□□□ -1.35
LINC00339-210ENST00000635675 SUMO4Q6EEV6 95 aa6.62□□□□□ -1.35
LINC00339-210ENST00000635675 TRAV8-6A0A0B4J262 113 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 IGHV3-38A0A0C4DH36 116 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 K7EP13 123 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 HLA-DQA1P01909 254 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 S100A8P05109 93 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 OR10J3Q5JRS4 329 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 LINC00336Q6ZUF6 198 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 AMN1Q8IY45 258 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 C6orf223Q8N319 242 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 GNB1LQ9BYB4 327 aa6.61□□□□□ -1.35
LINC00339-210ENST00000635675 SMKR1H3BMG3 65 aa6.6□□□□□ -1.35
LINC00339-210ENST00000635675 H7C1H1 209 aa6.6□□□□□ -1.35
LINC00339-210ENST00000635675 NCR2O95944 276 aa6.6□□□□□ -1.35
LINC00339-210ENST00000635675 BTF3P20290 206 aaKnown RBP6.6□□□□□ -1.35
LINC00339-210ENST00000635675 NDUFA6P56556 154 aa6.6□□□□□ -1.35
LINC00339-210ENST00000635675 COX19Q49B96 90 aa6.6□□□□□ -1.35
LINC00339-210ENST00000635675 DNAJC30Q96LL9 226 aa6.6□□□□□ -1.35
LINC00339-210ENST00000635675 TRAV9-2A0A087WT02 112 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 MT-ND6P03923 174 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 IQCJQ1A5X6 159 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 LINC01556Q5JQF7 62 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 RASL11AQ6T310 242 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 SMIM15Q7Z3B0 74 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 DNAH10Q8IVF4 4471 aa6.59□□□□□ -1.35
LINC00339-210ENST00000635675 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 A0A1B0GW15 77 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 PRSS29PA6NIE9 313 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BKO60814 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BJP06899 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BOP23527 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BBP33778 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BDP58876 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BCP62807 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST2H2BEQ16778 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 MRPL51Q4U2R6 128 aaKnown RBP6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.59□□□□□ -1.36
LINC00339-210ENST00000635675 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.36
LINC00339-210ENST00000635675 GATD1Q8NB37 220 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BHQ93079 126 aa6.59□□□□□ -1.36
LINC00339-210ENST00000635675 HIST1H2BNQ99877 126 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms