RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 A8MWL6 223 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 TMEM262E9PQX1 116 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
LINC00339-207ENST00000634712 CTRLP40313 264 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 LAGE3Q14657 143 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 FAM231DQ6ZW35 169 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 PGPEP1Q9NXJ5 209 aa10.55□□□□□ -0.72
LINC00339-207ENST00000634712 A0A087WTM6 91 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 TRAV8-3A0A0A6YYJ7 113 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 KRTAP10-2P60368 255 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 TMEM97Q5BJF2 176 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
LINC00339-207ENST00000634712 NIT1Q86X76 327 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 Q8N3U1 123 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 DNAJC30Q96LL9 226 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
LINC00339-207ENST00000634712 DAZ3Q9NR90 486 aaKnown RBP10.54□□□□□ -0.72
LINC00339-207ENST00000634712 TRBV6-8A0A0A6YYG3 113 aa10.53□□□□□ -0.72
LINC00339-207ENST00000634712 PEA15Q15121 130 aa10.53□□□□□ -0.72
LINC00339-207ENST00000634712 ELOBQ15370 118 aa10.53□□□□□ -0.72
LINC00339-207ENST00000634712 SUMO4Q6EEV6 95 aa10.53□□□□□ -0.72
LINC00339-207ENST00000634712 M0QY20 66 aa10.52□□□□□ -0.72
LINC00339-207ENST00000634712 FAM74A3Q4VXF1 159 aa10.52□□□□□ -0.72
LINC00339-207ENST00000634712 LINC01551Q86U37 167 aa10.52□□□□□ -0.72
LINC00339-207ENST00000634712 BORCS7Q96B45 105 aa10.52□□□□□ -0.72
LINC00339-207ENST00000634712 CHCHD7Q9BUK0 85 aa10.52□□□□□ -0.72
LINC00339-207ENST00000634712 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 CT83Q5H943 113 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 RASL11AQ6T310 242 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 GTSF1Q8WW33 167 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 PGLYRP4Q96LB8 373 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 CNFNQ9BYD5 112 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 KLK12Q9UKR0 248 aa10.52□□□□□ -0.73
LINC00339-207ENST00000634712 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
LINC00339-207ENST00000634712 PKIAP61925 76 aa10.51□□□□□ -0.73
LINC00339-207ENST00000634712 CDPF1Q6NVV7 123 aa10.51□□□□□ -0.73
LINC00339-207ENST00000634712 RMI2Q96E14 147 aa10.51□□□□□ -0.73
LINC00339-207ENST00000634712 SMDT1Q9H4I9 107 aa10.5□□□□□ -0.73
LINC00339-207ENST00000634712 NIT2Q9NQR4 276 aa10.5□□□□□ -0.73
LINC00339-207ENST00000634712 OSTCQ9NRP0 149 aa10.5□□□□□ -0.73
LINC00339-207ENST00000634712 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
LINC00339-207ENST00000634712 TRBV25-1A0A075B6N4 114 aa10.49□□□□□ -0.73
LINC00339-207ENST00000634712 TSKUQ8WUA8 353 aa10.49□□□□□ -0.73
LINC00339-207ENST00000634712 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
LINC00339-207ENST00000634712 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00339-207ENST00000634712 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-207ENST00000634712 Q0VG73 95 aa10.48□□□□□ -0.73
LINC00339-207ENST00000634712 GFRA4Q9GZZ7 299 aa10.48□□□□□ -0.73
LINC00339-207ENST00000634712 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
LINC00339-207ENST00000634712 HERC2O95714 4834 aa10.48□□□□□ -0.73
LINC00339-207ENST00000634712 IGKV2D-24A0A075B6R9 120 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 IGHV1-24A0A0C4DH33 117 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 LRCOL1A6NCL2 159 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 RAB14P61106 215 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 ADIRFQ15847 76 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 NTM-AS1Q6ZSK4 140 aa10.47□□□□□ -0.73
LINC00339-207ENST00000634712 FAM231BA6NCW3 169 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 C9JQL5 133 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 CRPP02741 224 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 ANGP03950 147 aaKnown RBP10.46□□□□□ -0.74
LINC00339-207ENST00000634712 RPL23P62829 140 aaKnown RBP10.46□□□□□ -0.74
LINC00339-207ENST00000634712 SRSF3P84103 164 aaKnown RBP10.46□□□□□ -0.74
LINC00339-207ENST00000634712 GAGE6Q13070 117 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 FRZBQ92765 325 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 ISOC2Q96AB3 205 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 LRP1BQ9NZR2 4599 aa10.46□□□□□ -0.74
LINC00339-207ENST00000634712 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
LINC00339-207ENST00000634712 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
LINC00339-207ENST00000634712 IQCJQ1A5X6 159 aa10.45□□□□□ -0.74
LINC00339-207ENST00000634712 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
LINC00339-207ENST00000634712 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
LINC00339-207ENST00000634712 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
LINC00339-207ENST00000634712 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
LINC00339-207ENST00000634712 COTL1Q14019 142 aa10.44□□□□□ -0.74
LINC00339-207ENST00000634712 Q8N814 137 aa10.44□□□□□ -0.74
LINC00339-207ENST00000634712 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-207ENST00000634712 V9GYV3 84 aa10.44□□□□□ -0.74
LINC00339-207ENST00000634712 GCSHP23434 173 aa10.43□□□□□ -0.74
LINC00339-207ENST00000634712 RIGQ13278 110 aa10.43□□□□□ -0.74
LINC00339-207ENST00000634712 Q8N976 141 aa10.43□□□□□ -0.74
LINC00339-207ENST00000634712 TMEM243Q9BU79 118 aa10.43□□□□□ -0.74
LINC00339-207ENST00000634712 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
LINC00339-207ENST00000634712 UBE2L6O14933 153 aa10.42□□□□□ -0.74
LINC00339-207ENST00000634712 RBX1P62877 108 aa10.42□□□□□ -0.74
LINC00339-207ENST00000634712 DEFB104AQ8WTQ1 72 aa10.42□□□□□ -0.74
LINC00339-207ENST00000634712 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
LINC00339-207ENST00000634712 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
LINC00339-207ENST00000634712 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
LINC00339-207ENST00000634712 LECT2O14960 151 aa10.41□□□□□ -0.74
LINC00339-207ENST00000634712 AMTP48728 403 aa10.41□□□□□ -0.74
LINC00339-207ENST00000634712 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
LINC00339-207ENST00000634712 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
LINC00339-207ENST00000634712 ENHOQ6UWT2 76 aa10.4□□□□□ -0.74
LINC00339-207ENST00000634712 RPL39LQ96EH5 51 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms