RNA–Protein interactions for RNA: ENST00000622991.1

PCDHB6-202, Transcript of protocadherin beta 6, humanhuman

TSL 2 BASIC

Gene PCDHB6, Length 2,608 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-202ENST00000622991 GAGE12FP0CL80 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 GAGE12GP0CL81 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 GAGE12IP0CL82 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 PSMB2P49721 201 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 GAGE4Q13068 117 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 KHDC1LQ5JSQ8 128 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 TEN1Q86WV5 123 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 TMEM86BQ8N661 226 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 RAX2Q96IS3 184 aa12□□□□□ -0.49
PCDHB6-202ENST00000622991 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 ZNF688P0C7X2 276 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 CITED1Q99966 193 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 MSRB1Q9NZV6 116 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
PCDHB6-202ENST00000622991 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 KIR2DL4Q99706 377 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 ATP5LO75964 103 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 OR10J6PQ8NGY7 276 aa11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 SETXQ7Z333 2677 aaKnown RBP11.98□□□□□ -0.49
PCDHB6-202ENST00000622991 RHODO00212 210 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 NDUFV3P56181 108 aaKnown RBP11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 OVOL1O14753 267 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
PCDHB6-202ENST00000622991 LINC00477Q96M19 166 aa11.96□□□□□ -0.49
PCDHB6-202ENST00000622991 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 LGALS9O00182 355 aa11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 SFTA2Q6UW10 78 aa11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.5
PCDHB6-202ENST00000622991 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 SPRY2O43597 315 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 GAGE2BQ13066 116 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 GAGE2EQ4V326 116 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 KLHL30-AS1Q8NEE0 82 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 GAGE2DQ9UEU5 116 aa11.95□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01549A6NIU2 74 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01546A6NGU7 62 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01619G3V211 115 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 SRSF2Q01130 221 aaKnown RBP11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
PCDHB6-202ENST00000622991 A0A087WX48 190 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 RNASE4P34096 147 aaKnown RBP11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 A0A1W2PRX2 142 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 LENEPQ9Y5L5 61 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 HIVEP1P15822 2718 aa11.93□□□□□ -0.5
PCDHB6-202ENST00000622991 A8MWV9 139 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 K7EQG2 157 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 CD28P10747 220 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 IFITM1P13164 125 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 ID1P41134 155 aa11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 NXT2Q9NPJ8 142 aaKnown RBP11.92□□□□□ -0.5
PCDHB6-202ENST00000622991 MYMXA0A1B0GTQ4 84 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 H3BVH4 76 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 SNCGO76070 127 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 ANKRD29Q8N6D5 301 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 LINC01006Q8NI28 216 aa11.91□□□□□ -0.5
PCDHB6-202ENST00000622991 UBE2D3P61077 147 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 UBE2D2P62837 147 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 LYRM7Q5U5X0 104 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 LY6G6DO95868 133 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 SBSPONQ8IVN8 264 aa11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 FN1P02751 2386 aaKnown RBP11.9□□□□□ -0.5
PCDHB6-202ENST00000622991 TRAV4A0A0B4J268 109 aa11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 TNFRSF6BO95407 300 aa11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 RNF185Q96GF1 192 aa11.9□□□□□ -0.51
PCDHB6-202ENST00000622991 TCL1BO95988 128 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 GNRH2O43555 120 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 CITED2Q99967 270 aaPredicted RBP11.89□□□□□ -0.51
PCDHB6-202ENST00000622991 PLNP26678 52 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 APRG1Q8IVJ8 170 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 A0A0J9YX75 114 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 UBE2D1P51668 147 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
PCDHB6-202ENST00000622991 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 KLLNB2CW77 178 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 CRLF1O75462 422 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 ASIPP42127 132 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 HILS1P60008 231 aa11.87□□□□□ -0.51
PCDHB6-202ENST00000622991 TRAV12-3A0A0B4J271 114 aa11.86□□□□□ -0.51
PCDHB6-202ENST00000622991 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
PCDHB6-202ENST00000622991 Q8N8P6 123 aa11.86□□□□□ -0.51
PCDHB6-202ENST00000622991 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 Q6Q795 121 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 SPANXA1Q9NS26 97 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
PCDHB6-202ENST00000622991 KNCNA6PVL3 124 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms