RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 HERVK_113P61574 105 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
LITAF-221ENST00000622633 TRGV3P03979 118 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 EEF1AKMT3Q96AZ1 226 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 TRAV13-1A0A0B4J241 112 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 A0A0J9YY99 117 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 H7C1H1 209 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 LMO4P61968 165 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 C2orf82Q6UX34 121 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 METTL26Q96S19 204 aa9.37□□□□□ -0.91
LITAF-221ENST00000622633 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 KLHL30-AS1Q8NEE0 82 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 IGLV2-18A0A075B6J9 118 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 C5orf38Q86SI9 138 aa9.36□□□□□ -0.91
LITAF-221ENST00000622633 Q6ZS46 218 aa9.35□□□□□ -0.91
LITAF-221ENST00000622633 C10orf105Q8TEF2 133 aa9.35□□□□□ -0.91
LITAF-221ENST00000622633 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 H7C423 109 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 C5orf56Q8N8D9 126 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 UPK3BQ9BT76 320 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 PRORYQ9H606 182 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
LITAF-221ENST00000622633 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
LITAF-221ENST00000622633 IGHV7-4-1A0A0J9YVY3 117 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 NSUN5P1Q3KNT7 163 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 U3KQE9 123 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 H7C2G1 150 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 IGF1P05019 195 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 LINC00643Q86TS7 51 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 TMEM263Q8WUH6 116 aaKnown RBP9.33□□□□□ -0.92
LITAF-221ENST00000622633 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 HIVEP3Q5T1R4 2406 aa9.33□□□□□ -0.92
LITAF-221ENST00000622633 C9orf47Q6ZRZ4 202 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 H3BT86 120 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 ATOX1O00244 68 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 SPRY2O43597 315 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 PRR9Q5T870 116 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 NRACQ8N912 160 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
LITAF-221ENST00000622633 SPANXN1Q5VSR9 72 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 TRBV12-3P01733 135 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 CXCL5P42830 114 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 DEFB1P60022 68 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 C1orf195Q5TG92 126 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 SLC25A29Q8N8R3 303 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
LITAF-221ENST00000622633 MRPL53Q96EL3 112 aaKnown RBP9.31□□□□□ -0.92
LITAF-221ENST00000622633 UNQ9165/PRO28630Q6UXU0 137 aa9.3□□□□□ -0.92
LITAF-221ENST00000622633 C19orf84I3L1E1 186 aa9.3□□□□□ -0.92
LITAF-221ENST00000622633 AVPP01185 164 aa9.3□□□□□ -0.92
LITAF-221ENST00000622633 ACYP1P07311 99 aa9.3□□□□□ -0.92
LITAF-221ENST00000622633 LAGE3Q14657 143 aa9.3□□□□□ -0.92
LITAF-221ENST00000622633 BRD3OSQ6XYD6 125 aa9.3□□□□□ -0.92
LITAF-221ENST00000622633 SPTBN4Q9H254 2564 aa9.29□□□□□ -0.92
LITAF-221ENST00000622633 SDIM1Q6ZPB5 146 aa9.29□□□□□ -0.92
LITAF-221ENST00000622633 BEX4Q9NWD9 120 aaPredicted RBP9.29□□□□□ -0.92
LITAF-221ENST00000622633 MOB4Q9Y3A3 225 aa9.29□□□□□ -0.92
LITAF-221ENST00000622633 ZFHX3Q15911 3703 aa9.29□□□□□ -0.92
LITAF-221ENST00000622633 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 TRIAP1O43715 76 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 ITLN2Q8WWU7 325 aaPredicted RBP9.28□□□□□ -0.92
LITAF-221ENST00000622633 CELSR1Q9NYQ6 3014 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 IGHV4-4A0A075B6R2 117 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
LITAF-221ENST00000622633 M0R381 172 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 LY6EQ16553 131 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 GPHB5Q86YW7 130 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 C14orf178Q8N769 122 aaPredicted RBP9.27□□□□□ -0.93
LITAF-221ENST00000622633 SPTAN1Q13813 2472 aaKnown RBP9.27□□□□□ -0.93
LITAF-221ENST00000622633 IGKV3-7A0A075B6H7 116 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 IGHV1-69DA0A0B4J2H0 117 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 IGHV1-69P01742 117 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 IGHV3-11P01762 117 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 Q1RN00 199 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 ZFAND2AQ8N6M9 145 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 NCOR2Q9Y618 2525 aa9.27□□□□□ -0.93
LITAF-221ENST00000622633 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
LITAF-221ENST00000622633 CHD8Q9HCK8 2581 aa9.26□□□□□ -0.93
LITAF-221ENST00000622633 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
LITAF-221ENST00000622633 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
LITAF-221ENST00000622633 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms