RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 TMEM141Q96I45 108 aa8.59□□□□□ -1.04
PCDHGA11-203ENST00000622044 SIRPDQ9H106 197 aa8.59□□□□□ -1.04
PCDHGA11-203ENST00000622044 PRO0461Q9UI25 63 aa8.59□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 DUX3Q96PT4 197 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 COL27A1Q8IZC6 1860 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 GATA3P23771 443 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 C15orf53Q8NAA6 179 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 P0DMU3 169 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 SYNJ2BPP57105 145 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 AJUBAQ96IF1 538 aa8.58□□□□□ -1.04
PCDHGA11-203ENST00000622044 H3BMM0 161 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 UBE2WQ96B02 151 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 CDIP1Q9H305 208 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 LENEPQ9Y5L5 61 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 A8MZ25 164 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 ATP5J2P56134 94 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 Q8N1Y9 231 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
PCDHGA11-203ENST00000622044 KLRB1Q12918 225 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV3-30P01768 117 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV3-30-5P0DP03 117 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV4-38-2P0DP08 117 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 UBE2D1P51668 147 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 ADORA2A-AS1P86434 159 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 ZNF575Q86XF7 245 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 PSMG3-AS1Q96PY0 264 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV1-69DA0A0B4J2H0 117 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 ATP6V0E2Q8NHE4 81 aa8.56□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE5Q13069 117 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE6Q13070 117 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 PRM2P04554 102 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 CRYGDP07320 174 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 EBI3Q14213 229 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 CFAP46Q8IYW2 2715 aa8.55□□□□□ -1.04
PCDHGA11-203ENST00000622044 TRAV4A0A0B4J268 109 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 I3L3M4 83 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV1-69P01742 117 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 IFITM1P13164 125 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 CRYBG3Q68DQ2 2970 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 Q6ZSV7 163 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 MAPK1IP1LQ8NDC0 245 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 TSHBP01222 138 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 FHL3Q13643 280 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 CIRBPQ14011 172 aaKnown RBP8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
PCDHGA11-203ENST00000622044 GPHB5Q86YW7 130 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 SMIM20Q8N5G0 67 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 UTP20O75691 2785 aaKnown RBP8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 RHODO00212 210 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 LEPROTO15243 131 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 PRB1P04280 392 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 ITLN2Q8WWU7 325 aaPredicted RBP8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 TOMM7Q9P0U1 55 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE7O76087 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 IGHV3-33P01772 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE12FP0CL80 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE12GP0CL81 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE12IP0CL82 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 PROK1P58294 105 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 GAGE4Q13068 117 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 LINC01587Q99440 93 aa8.53□□□□□ -1.04
PCDHGA11-203ENST00000622044 A0A1W2PPR1 153 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 LINC01546A6NGU7 62 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 IGHV3-30-3P0DP02 117 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 UBE2D3P61077 147 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 UBE2D2P62837 147 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 DCHS2Q6V1P9 2916 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 JMJD1CQ15652 2540 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 RS1O15537 224 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 GNLYP22749 145 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 ITPR1Q14643 2758 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 ZNF22P17026 224 aaPredicted RBP8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 DEFB131AP59861 70 aa8.52□□□□□ -1.05
PCDHGA11-203ENST00000622044 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms