RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SHROOM3Q8TF72 1996 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 NWD2Q9ULI1 1742 aa1.94□□□□□ -2.1
BRCA1-229ENST00000621897 UNC13BO14795 1591 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 CUL9Q8IWT3 2517 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 PLXNA1Q9UIW2 1896 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 TRAV13-2A0A0B4J235 113 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 A6NIN4 97 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 SYS1-DBNDD2H3BUS1 97 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 CFDP00746 253 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 ASAH2BP0C7U1 165 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 P0C880 135 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 HINT1P49773 126 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 GNG11P61952 73 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 RPL7L1Q6DKI1 246 aaKnown RBP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 NDUFA11Q86Y39 141 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 OR10AG1Q8NH19 301 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 Q8TAT8 98 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 ZNF431Q8TF32 576 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 LINC01600Q96MT4 127 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 AMELYQ99218 206 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 Q9BRP9 147 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 CDK12Q9NYV4 1490 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 SETBP1Q9Y6X0 1596 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 KIAA0100Q14667 2235 aaKnown RBP1.93□□□□□ -2.1
BRCA1-229ENST00000621897 LAMB4A4D0S4 1761 aa1.93□□□□□ -2.1
BRCA1-229ENST00000621897 HFM1A2PYH4 1435 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 BLMP54132 1417 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-229ENST00000621897 HEATR5BQ9P2D3 2071 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 CUX1P39880 1505 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 KCPQ6ZWJ8 1503 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 MYO5CQ9NQX4 1742 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 TMSB15BA0A087X1C1 80 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 TRBV7-1A0A0A6YYK4 115 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 MUC21A0A140T8X8 626 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 CXorf51AA0A1B0GTR3 108 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 ERHP84090 104 aaKnown RBP1.92□□□□□ -2.1
BRCA1-229ENST00000621897 HMGN3Q15651 99 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 ETDBQ3ZM63 59 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 NDUFB11Q9NX14 153 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 C22orf24Q9Y442 160 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 R4GN34 69 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 MLH3Q9UHC1 1453 aa1.92□□□□□ -2.1
BRCA1-229ENST00000621897 EDC4Q6P2E9 1401 aaKnown RBP1.91□□□□□ -2.1
BRCA1-229ENST00000621897 ABCC1P33527 1531 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 UBR1Q8IWV7 1749 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 STRCP1A6NGW2 1772 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 RGPD8O14715 1765 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-229ENST00000621897 RGPD2P0DJD1 1756 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 RGPD5Q99666 1765 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 LRRC9Q6ZRR7 1453 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 A0A1W2PNM2 257 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 CRYM-AS1A6NIL9 109 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 HCG22E2RYF7 251 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 IGHV3-33P01772 117 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 MPV17LQ2QL34 196 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 NMSQ5H8A3 153 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 C9orf163Q8N9P6 203 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 MED12LQ86YW9 2145 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 DOCK2Q92608 1830 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 TARBP1Q13395 1621 aaKnown RBP1.91□□□□□ -2.1
BRCA1-229ENST00000621897 PREX2Q70Z35 1606 aa1.91□□□□□ -2.1
BRCA1-229ENST00000621897 MPDZO75970 2070 aa1.9□□□□□ -2.1
BRCA1-229ENST00000621897 EXPH5Q8NEV8 1989 aa1.9□□□□□ -2.1
BRCA1-229ENST00000621897 IQSEC2Q5JU85 1478 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 BTAF1O14981 1849 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 KANTRA0A1W2PQU2 76 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 BCE1O60756 84 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 SIX6O95475 246 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 PDE6HQ13956 83 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 HEPN1Q6WQI6 88 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 FAM167A-AS1Q96KT0 104 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 NXT2Q9NPJ8 142 aaKnown RBP1.9□□□□□ -2.11
BRCA1-229ENST00000621897 MYOFQ9NZM1 2061 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 SLIT2O94813 1529 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 KDM3BQ7LBC6 1761 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 COL4A5P29400 1685 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.11
BRCA1-229ENST00000621897 COL4A6Q14031 1691 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 ADAMTS7Q9UKP4 1686 aa1.9□□□□□ -2.11
BRCA1-229ENST00000621897 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 C2orf70A6NJV1 201 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 H7BZZ5 65 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 WFDC2Q14508 124 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 IGFBP7Q16270 282 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 LYPD5Q6UWN5 251 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 ZNF818PQ6ZRF7 136 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 Q6ZTI0 123 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 VMO1Q7Z5L0 202 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 CMTM2Q8TAZ6 248 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 TIMM21Q9BVV7 248 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 CYSTM1Q9H1C7 97 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 CDK13Q14004 1512 aaKnown RBP1.89□□□□□ -2.11
BRCA1-229ENST00000621897 MICAL3Q7RTP6 2002 aa1.89□□□□□ -2.11
BRCA1-229ENST00000621897 DIP2CQ9Y2E4 1556 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms