RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ZNF727A8MUV8 499 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 CIDEAO60543 219 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 SSTP61278 116 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 LINC01551Q86U37 167 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 Q8N3U1 123 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 Q8N814 137 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 SYT8Q8NBV8 401 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 GTSF1LQ9H1H1 148 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 BIN3Q9NQY0 253 aa7.44□□□□□ -1.22
TARDBP-221ENST00000619555 RPS20P60866 119 aaKnown RBP7.43□□□□□ -1.22
TARDBP-221ENST00000619555 FAM74A4Q5TZK3 123 aa7.43□□□□□ -1.22
TARDBP-221ENST00000619555 ZFP2Q6ZN57 461 aa7.43□□□□□ -1.22
TARDBP-221ENST00000619555 C14orf178Q8N769 122 aaPredicted RBP7.43□□□□□ -1.22
TARDBP-221ENST00000619555 FER1L6-AS1Q8NA97 138 aa7.43□□□□□ -1.22
TARDBP-221ENST00000619555 NTN5Q8WTR8 489 aaPredicted RBP7.43□□□□□ -1.22
TARDBP-221ENST00000619555 TMEM70Q9BUB7 260 aa7.43□□□□□ -1.22
TARDBP-221ENST00000619555 TPPP3Q9BW30 176 aa7.43□□□□□ -1.22
TARDBP-221ENST00000619555 RPP21Q9H633 154 aaKnown RBP7.43□□□□□ -1.22
TARDBP-221ENST00000619555 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
TARDBP-221ENST00000619555 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 WFDC2Q14508 124 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 PEA15Q15121 130 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 CLLU1Q5K131 121 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 SPANXN1Q5VSR9 72 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 GTSF1Q8WW33 167 aa7.42□□□□□ -1.22
TARDBP-221ENST00000619555 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 LINC00694P0DN24 101 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 CTRLP40313 264 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 RPL23P62829 140 aaKnown RBP7.41□□□□□ -1.22
TARDBP-221ENST00000619555 GAGE1Q13065 139 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 GAGE4Q13068 117 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 GAGE5Q13069 117 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 KIF25-AS1Q9Y6Z4 181 aa7.41□□□□□ -1.22
TARDBP-221ENST00000619555 RHODO00212 210 aa7.4□□□□□ -1.22
TARDBP-221ENST00000619555 GATCO43716 136 aaKnown RBP7.4□□□□□ -1.22
TARDBP-221ENST00000619555 RAB14P61106 215 aa7.4□□□□□ -1.22
TARDBP-221ENST00000619555 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
TARDBP-221ENST00000619555 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
TARDBP-221ENST00000619555 XKRY2A2RUG3 117 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 LECT2O14960 151 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 LAGE3Q14657 143 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 TMEM241Q24JQ0 296 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 DAZ4Q86SG3 579 aaKnown RBP7.39□□□□□ -1.23
TARDBP-221ENST00000619555 CNFNQ9BYD5 112 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 DAZ3Q9NR90 486 aaKnown RBP7.39□□□□□ -1.23
TARDBP-221ENST00000619555 OSTCQ9NRP0 149 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 V9GYV3 84 aa7.39□□□□□ -1.23
TARDBP-221ENST00000619555 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
TARDBP-221ENST00000619555 F2Z2F3 143 aa7.38□□□□□ -1.23
TARDBP-221ENST00000619555 NTF3P20783 257 aa7.38□□□□□ -1.23
TARDBP-221ENST00000619555 CACNG7P62955 275 aa7.38□□□□□ -1.23
TARDBP-221ENST00000619555 ADIRFQ15847 76 aa7.38□□□□□ -1.23
TARDBP-221ENST00000619555 CT83Q5H943 113 aa7.38□□□□□ -1.23
TARDBP-221ENST00000619555 AP1S3Q96PC3 154 aa7.38□□□□□ -1.23
TARDBP-221ENST00000619555 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 TRAV8-3A0A0A6YYJ7 113 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 RAB4BP61018 213 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 ZNF56Q15929 161 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 DNAJC30Q96LL9 226 aa7.37□□□□□ -1.23
TARDBP-221ENST00000619555 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.36□□□□□ -1.23
TARDBP-221ENST00000619555 A8MWL6 223 aa7.36□□□□□ -1.23
TARDBP-221ENST00000619555 FOXA3P55318 350 aaPredicted RBP7.36□□□□□ -1.23
TARDBP-221ENST00000619555 LINC01620Q4KN68 170 aa7.36□□□□□ -1.23
TARDBP-221ENST00000619555 WDR73Q6P4I2 378 aa7.36□□□□□ -1.23
TARDBP-221ENST00000619555 NEXN-AS1Q8NBZ9 246 aa7.36□□□□□ -1.23
TARDBP-221ENST00000619555 TSKUQ8WUA8 353 aa7.36□□□□□ -1.23
TARDBP-221ENST00000619555 A0A087WWC5 75 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 MGPP08493 103 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 ADCYAP1P18509 176 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 TWIST1Q15672 202 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 Q6ZSA8 131 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 OR10G8Q8NGN5 311 aa7.35□□□□□ -1.23
TARDBP-221ENST00000619555 TRBV10-1A0A0K0K1A3 114 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 F5H697 171 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 M0QY20 66 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 TRGC1P0CF51 173 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 UBE2D3P61077 147 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 UBE2D2P62837 147 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 NIT1Q86X76 327 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 C15orf54Q8N8G6 183 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 NUP35Q8NFH5 326 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
TARDBP-221ENST00000619555 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
TARDBP-221ENST00000619555 IGKV2D-24A0A075B6R9 120 aa7.33□□□□□ -1.24
TARDBP-221ENST00000619555 KLK12Q9UKR0 248 aa7.33□□□□□ -1.24
TARDBP-221ENST00000619555 URGCP-MRPS24S4R325 110 aa7.33□□□□□ -1.24
TARDBP-221ENST00000619555 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms