RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 OSTCQ9NRP0 149 aa5.58□□□□□ -1.52
NEK3-209ENST00000618856 TRAV9-2A0A087WT02 112 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 A0A087WWC5 75 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 M0QY20 66 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 NTF3P20783 257 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 TNP2Q05952 138 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 PEA15Q15121 130 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 GFRA4Q9GZZ7 299 aa5.57□□□□□ -1.52
NEK3-209ENST00000618856 TRAV8-6A0A0B4J262 113 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 A8MWL6 223 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 IBA57-AS1B1ANH7 110 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 GATCO43716 136 aaKnown RBP5.56□□□□□ -1.52
NEK3-209ENST00000618856 EVI2AP22794 236 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 ERVFC1-1P60608 527 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 RPL23P62829 140 aaKnown RBP5.56□□□□□ -1.52
NEK3-209ENST00000618856 RPL36AP83881 106 aaKnown RBP5.56□□□□□ -1.52
NEK3-209ENST00000618856 IFITM2Q01629 132 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 TMEM241Q24JQ0 296 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 CLLU1Q5K131 121 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 C10orf126Q8N4M7 172 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 TSKUQ8WUA8 353 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 RPL36ALQ969Q0 106 aaKnown RBP5.56□□□□□ -1.52
NEK3-209ENST00000618856 ISOC2Q96AB3 205 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 TPPP3Q9BW30 176 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 V9GYV3 84 aa5.56□□□□□ -1.52
NEK3-209ENST00000618856 TRGC1P0CF51 173 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 CEBPGP53567 150 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 LAGE3Q14657 143 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 ZNF56Q15929 161 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 OR10J3Q5JRS4 329 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 SUMO4Q6EEV6 95 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 NFE4Q86UQ8 179 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 FRZBQ92765 325 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 NAT8Q9UHE5 227 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 TNFRSF18Q9Y5U5 241 aa5.55□□□□□ -1.52
NEK3-209ENST00000618856 TRBV6-8A0A0A6YYG3 113 aa5.54□□□□□ -1.52
NEK3-209ENST00000618856 SMIM17P0DL12 118 aa5.54□□□□□ -1.52
NEK3-209ENST00000618856 SSTP61278 116 aa5.54□□□□□ -1.52
NEK3-209ENST00000618856 NTM-AS1Q6ZSK4 140 aa5.54□□□□□ -1.52
NEK3-209ENST00000618856 DAZ4Q86SG3 579 aaKnown RBP5.54□□□□□ -1.52
NEK3-209ENST00000618856 NIT1Q86X76 327 aa5.54□□□□□ -1.52
NEK3-209ENST00000618856 CHCHD7Q9BUK0 85 aa5.54□□□□□ -1.52
NEK3-209ENST00000618856 DAZ3Q9NR90 486 aaKnown RBP5.54□□□□□ -1.52
NEK3-209ENST00000618856 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 F5H697 171 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 H7C1H1 209 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 TWIST1Q15672 202 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 RASL11AQ6T310 242 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 Q8N3U1 123 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 GATD1Q8NB37 220 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 ANAPC16Q96DE5 110 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
NEK3-209ENST00000618856 ABCA13Q86UQ4 5058 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 A0A1B0GUT8 65 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 SMIM27A0A1W2PRY6 76 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 RAB14P61106 215 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 IQCJQ1A5X6 159 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 TMEM97Q5BJF2 176 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 C15orf54Q8N8G6 183 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 NUP35Q8NFH5 326 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 PGLYRP4Q96LB8 373 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 TMEM191AQ9H0A3 160 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 NIT2Q9NQR4 276 aa5.52□□□□□ -1.53
NEK3-209ENST00000618856 TRBV6-5A0A0K0K1A5 114 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 LRCOL1A6NCL2 159 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 IGHV3-30P01768 117 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 IGHV3-33P01772 117 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 MGPP08493 103 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 IGHV3-30-3P0DP02 117 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 IGHV3-30-5P0DP03 117 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 ADIRFQ15847 76 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 ATRAIDQ6UW56 229 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 RNF185Q96GF1 192 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 FAT1Q14517 4588 aa5.51□□□□□ -1.53
NEK3-209ENST00000618856 A0A087WTM6 91 aa5.5□□□□□ -1.53
NEK3-209ENST00000618856 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
NEK3-209ENST00000618856 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
NEK3-209ENST00000618856 NAT8BQ9UHF3 227 aa5.5□□□□□ -1.53
NEK3-209ENST00000618856 TRAV26-2A0A0B4J265 109 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 A0A1B0GXF2 115 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 RAB4AP20338 218 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 PKIAP61925 76 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 PNRC1Q12796 327 aaPredicted RBP5.49□□□□□ -1.53
NEK3-209ENST00000618856 UQCC3Q6UW78 93 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 SMIM15Q7Z3B0 74 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 SPATA12Q7Z6I5 190 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.49□□□□□ -1.53
NEK3-209ENST00000618856 PRR34Q9NV39 138 aa5.49□□□□□ -1.53
NEK3-209ENST00000618856 TRBV25-1A0A075B6N4 114 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 A0A087WX48 190 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 IGHV1-24A0A0C4DH33 117 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 A0A1B0GW15 77 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 GAS8-AS1O95177 125 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 GHRHP01286 108 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 ADCYAP1P18509 176 aa5.48□□□□□ -1.53
NEK3-209ENST00000618856 RIGQ13278 110 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms