RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 KAAG1Q9UBP8 84 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 COA6Q5JTJ3 125 aaKnown RBP4.61□□□□□ -1.67
RFX3-212ENST00000617270 UBE2D4Q9Y2X8 147 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 DEFB113Q30KQ7 82 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 IGFL3Q6UXB1 125 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 PTPRDP23468 1912 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 MDFICQ9P1T7 246 aa4.61□□□□□ -1.67
RFX3-212ENST00000617270 MED14OSP0DP75 135 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 IGLV1-44P01699 117 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 SPRNQ5BIV9 151 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 C11orf45Q8TAV5 145 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 PPDPFQ9H3Y8 114 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 P0DMU3 169 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 FAM231AP0DMU4 169 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 FAM231CP0DMU5 169 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 IGLV11-55A0A075B6I3 123 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 UQCRQO14949 82 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 CRYGDP07320 174 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 ZFP36P26651 326 aaKnown RBP4.6□□□□□ -1.67
RFX3-212ENST00000617270 ODF1Q14990 250 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 UFSP1Q6NVU6 142 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 C9orf85Q96MD7 179 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 MYO18BQ8IUG5 2567 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
RFX3-212ENST00000617270 CCKP06307 115 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 Q8NFD4 153 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 SORL1Q92673 2214 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 UBE2D1P51668 147 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 ZFAND2AQ8N6M9 145 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 Q8N9L7 120 aa4.6□□□□□ -1.67
RFX3-212ENST00000617270 PATE2Q6UY27 113 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 CHCHD10Q8WYQ3 142 aaPredicted RBP4.59□□□□□ -1.67
RFX3-212ENST00000617270 PRO0255Q9UI72 69 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 BRCA1P38398 1863 aaKnown RBP4.59□□□□□ -1.67
RFX3-212ENST00000617270 MED13Q9UHV7 2174 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 PIK3CD-AS1Q5SR53 167 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 SERP2Q8N6R1 65 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 C4orf3Q8WVX3 66 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 COL11A2P13942 1736 aaPredicted RBP4.59□□□□□ -1.67
RFX3-212ENST00000617270 TIMM17BO60830 172 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 PLXNA1Q9UIW2 1896 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
RFX3-212ENST00000617270 XAGE1AQ9HD64 81 aa4.59□□□□□ -1.68
RFX3-212ENST00000617270 COL4A1P02462 1669 aa4.59□□□□□ -1.68
RFX3-212ENST00000617270 A0A0J9YXY3 114 aa4.59□□□□□ -1.68
RFX3-212ENST00000617270 TRBV6-1A0A0K0K1D8 114 aa4.59□□□□□ -1.68
RFX3-212ENST00000617270 SPG11Q96JI7 2443 aa4.59□□□□□ -1.68
RFX3-212ENST00000617270 IGKV2-28A0A075B6P5 120 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 IGKV2D-28P01615 120 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
RFX3-212ENST00000617270 DSCAML1Q8TD84 2053 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 C5orf56Q8N8D9 126 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 PROK2Q9HC23 129 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 ARID2Q68CP9 1835 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 UBE2D3P61077 147 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 RETNQ9HD89 108 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 BDP1A6H8Y1 2624 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 CTRLP40313 264 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 Q6ZTI0 123 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 TRPM7Q96QT4 1865 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 TAF1LQ8IZX4 1826 aa4.58□□□□□ -1.68
RFX3-212ENST00000617270 TRBV27A0A0K0K1C4 114 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 UBR3Q6ZT12 1888 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 POM121L12Q8N7R1 296 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 C7orf33Q8WU49 177 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 WNK3Q9BYP7 1800 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 TRBV10-1A0A0K0K1A3 114 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 MYCNOSP40205 109 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 A0A0G2JMZ2 1700 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 LRRC37A2A6NM11 1700 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 FRMD6-AS1P0C7T7 363 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 UNQ9165/PRO28630Q6UXU0 137 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 RALGAPA2Q2PPJ7 1873 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 C11orf53Q8IXP5 236 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 ZFAND3Q9H8U3 227 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 TP73-AS1Q9UF72 201 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 TP53TG3Q9ULZ0 132 aa4.57□□□□□ -1.68
RFX3-212ENST00000617270 TNRC6AQ8NDV7 1962 aaKnown RBP4.56□□□□□ -1.68
RFX3-212ENST00000617270 IL17DQ8TAD2 202 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 HIVEP2P31629 2446 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 COL24A1Q17RW2 1714 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 COL18A1P39060 1754 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 RSPO1Q2MKA7 263 aaPredicted RBP4.56□□□□□ -1.68
RFX3-212ENST00000617270 C1orf195Q5TG92 126 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 MAP6D1Q9H9H5 199 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 SPATA12Q7Z6I5 190 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 X6R8D5 127 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 LY6G6EA0A0G2JKS1 128 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 FAM222AQ5U5X8 452 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 MYLKQ15746 1914 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 A0A0J9YX75 114 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 LINC00467Q9BRT7 94 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 IGLV9-49A0A0B4J1Y8 123 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 NDUFA7O95182 113 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 NRXN2Q9P2S2 1712 aa4.56□□□□□ -1.68
RFX3-212ENST00000617270 ZNF524Q96C55 264 aa4.55□□□□□ -1.68
RFX3-212ENST00000617270 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms