RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CEMP1Q6PRD7 247 aaPredicted RBP14.37□□□□□ -0.11
SPAST-203ENST00000615843 IGLV10-54A0A075B6I4 117 aa14.37□□□□□ -0.11
SPAST-203ENST00000615843 H3BQ85 93 aa14.37□□□□□ -0.11
SPAST-203ENST00000615843 U3KQK5 164 aa14.37□□□□□ -0.11
SPAST-203ENST00000615843 IGHV4-28A0A0C4DH34 117 aa14.37□□□□□ -0.11
SPAST-203ENST00000615843 K7EMT4 169 aa14.37□□□□□ -0.11
SPAST-203ENST00000615843 SPATA25Q9BR10 227 aa14.36□□□□□ -0.11
SPAST-203ENST00000615843 WFDC9Q8NEX5 89 aa14.36□□□□□ -0.11
SPAST-203ENST00000615843 LINC00574Q9H8X3 128 aa14.36□□□□□ -0.11
SPAST-203ENST00000615843 DSCAML1Q8TD84 2053 aa14.36□□□□□ -0.11
SPAST-203ENST00000615843 TMEM256-PLSCR3K7ERE1 68 aa14.35□□□□□ -0.11
SPAST-203ENST00000615843 GYPEP15421 78 aa14.35□□□□□ -0.11
SPAST-203ENST00000615843 C16orf74Q96GX8 76 aa14.35□□□□□ -0.11
SPAST-203ENST00000615843 TNRC6BQ9UPQ9 1833 aaKnown RBP14.35□□□□□ -0.11
SPAST-203ENST00000615843 PRB2P02812 416 aaPredicted RBP14.35□□□□□ -0.11
SPAST-203ENST00000615843 IGHV4-38-2P0DP08 117 aa14.35□□□□□ -0.11
SPAST-203ENST00000615843 CRIP1P50238 77 aa14.35□□□□□ -0.11
SPAST-203ENST00000615843 TRAV23DV6A0A075B6W5 121 aa14.34□□□□□ -0.11
SPAST-203ENST00000615843 NCR3O14931 201 aa14.34□□□□□ -0.11
SPAST-203ENST00000615843 C3orf22Q8N5N4 141 aa14.34□□□□□ -0.11
SPAST-203ENST00000615843 MYCNOSP40205 109 aa14.34□□□□□ -0.11
SPAST-203ENST00000615843 UNQ9165/PRO28630Q6UXU0 137 aa14.34□□□□□ -0.11
SPAST-203ENST00000615843 BRK1Q8WUW1 75 aa14.33□□□□□ -0.11
SPAST-203ENST00000615843 HIST2H2BDQ6DRA6 164 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 SEM1Q6ZVN7 128 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 PCNX2A6NKB5 2137 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 LINC00310P59036 64 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 P0DMU3 169 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 FAM231AP0DMU4 169 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 FAM231CP0DMU5 169 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 SDIM1Q6ZPB5 146 aa14.33□□□□□ -0.12
SPAST-203ENST00000615843 DEFB121Q5J5C9 76 aa14.32□□□□□ -0.12
SPAST-203ENST00000615843 ZNF106Q9H2Y7 1883 aaKnown RBP14.32□□□□□ -0.12
SPAST-203ENST00000615843 Q96MF0 132 aa14.32□□□□□ -0.12
SPAST-203ENST00000615843 CAMK2N2Q96S95 79 aa14.32□□□□□ -0.12
SPAST-203ENST00000615843 TRIAP1O43715 76 aa14.32□□□□□ -0.12
SPAST-203ENST00000615843 MP68P56378 58 aa14.32□□□□□ -0.12
SPAST-203ENST00000615843 RNF185Q96GF1 192 aa14.32□□□□□ -0.12
SPAST-203ENST00000615843 SP5Q6BEB4 398 aaPredicted RBP14.31□□□□□ -0.12
SPAST-203ENST00000615843 ETDCA0A1B0GVM5 59 aa14.31□□□□□ -0.12
SPAST-203ENST00000615843 IGKV2D-24A0A075B6R9 120 aa14.31□□□□□ -0.12
SPAST-203ENST00000615843 IGHV3-33P01772 117 aa14.31□□□□□ -0.12
SPAST-203ENST00000615843 CFAP126Q5VTH2 177 aa14.31□□□□□ -0.12
SPAST-203ENST00000615843 GPHB5Q86YW7 130 aa14.31□□□□□ -0.12
SPAST-203ENST00000615843 C20orf197Q8N268 126 aa14.31□□□□□ -0.12
SPAST-203ENST00000615843 TNCP24821 2201 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 A0A0J9YX75 114 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 TMEM223A0PJW6 202 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 CCL24O00175 119 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 ZNF22P17026 224 aaPredicted RBP14.3□□□□□ -0.12
SPAST-203ENST00000615843 RMI2Q96E14 147 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 IGHV4-61A0A0C4DH41 118 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 TRBV30A0A0K0K1B3 111 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 UBE2BP63146 152 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 IGHV4OR15-8A0A075B7B6 117 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 A0A087WW49 117 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 Q8N976 141 aa14.3□□□□□ -0.12
SPAST-203ENST00000615843 UPK3BQ9BT76 320 aa14.29□□□□□ -0.12
SPAST-203ENST00000615843 NDUFS5O43920 106 aa14.29□□□□□ -0.12
SPAST-203ENST00000615843 TRBV12-3P01733 135 aa14.29□□□□□ -0.12
SPAST-203ENST00000615843 MRPS12O15235 138 aaKnown RBP14.29□□□□□ -0.12
SPAST-203ENST00000615843 CCDC140Q96MF4 163 aa14.29□□□□□ -0.12
SPAST-203ENST00000615843 ZFP36P26651 326 aaKnown RBP14.28□□□□□ -0.12
SPAST-203ENST00000615843 XGP55808 180 aa14.28□□□□□ -0.12
SPAST-203ENST00000615843 CXCL5P42830 114 aa14.28□□□□□ -0.12
SPAST-203ENST00000615843 PDE6GP18545 87 aa14.28□□□□□ -0.12
SPAST-203ENST00000615843 PIP4P1Q86T03 277 aa14.27□□□□□ -0.12
SPAST-203ENST00000615843 IGLV2-11P01706 119 aa14.27□□□□□ -0.13
SPAST-203ENST00000615843 INSL3P51460 131 aa14.26□□□□□ -0.13
SPAST-203ENST00000615843 FAM236DA0A1B0GTK5 79 aa14.26□□□□□ -0.13
SPAST-203ENST00000615843 FAM236CP0DP71 79 aa14.26□□□□□ -0.13
SPAST-203ENST00000615843 DIRC1Q969H9 104 aa14.26□□□□□ -0.13
SPAST-203ENST00000615843 HIGD2BQ4VC39 106 aa14.26□□□□□ -0.13
SPAST-203ENST00000615843 CLUHP3Q96NS8 147 aa14.25□□□□□ -0.13
SPAST-203ENST00000615843 IGLV4-3A0A075B6K6 122 aa14.25□□□□□ -0.13
SPAST-203ENST00000615843 RPL18AQ02543 176 aaKnown RBP14.25□□□□□ -0.13
SPAST-203ENST00000615843 MED12LQ86YW9 2145 aa14.25□□□□□ -0.13
SPAST-203ENST00000615843 CDKN2A-AS1Q9UH64 79 aa14.25□□□□□ -0.13
SPAST-203ENST00000615843 CCDC179H3BU77 68 aa14.24□□□□□ -0.13
SPAST-203ENST00000615843 IGHV3-30P01768 117 aa14.24□□□□□ -0.13
SPAST-203ENST00000615843 IGHV3-30-5P0DP03 117 aa14.24□□□□□ -0.13
SPAST-203ENST00000615843 PLXNB1O43157 2135 aa14.24□□□□□ -0.13
SPAST-203ENST00000615843 WISP2O76076 250 aa14.24□□□□□ -0.13
SPAST-203ENST00000615843 NDUFA7O95182 113 aa14.23□□□□□ -0.13
SPAST-203ENST00000615843 SIRPDQ9H106 197 aa14.23□□□□□ -0.13
SPAST-203ENST00000615843 IGF1P05019 195 aa14.23□□□□□ -0.13
SPAST-203ENST00000615843 LINC00308Q8TCZ7 52 aa14.23□□□□□ -0.13
SPAST-203ENST00000615843 TRBV10-1A0A0K0K1A3 114 aa14.23□□□□□ -0.13
SPAST-203ENST00000615843 SPRY4Q9C004 299 aa14.23□□□□□ -0.13
SPAST-203ENST00000615843 NDUFA1O15239 70 aa14.22□□□□□ -0.13
SPAST-203ENST00000615843 UFSP1Q6NVU6 142 aa14.22□□□□□ -0.13
SPAST-203ENST00000615843 HHLA3Q9XRX5 114 aa14.22□□□□□ -0.13
SPAST-203ENST00000615843 ADAMTS9Q9P2N4 1935 aa14.22□□□□□ -0.13
SPAST-203ENST00000615843 SPAG11BQ08648 103 aa14.22□□□□□ -0.13
SPAST-203ENST00000615843 KIAA1549LQ6ZVL6 1849 aa14.22□□□□□ -0.13
SPAST-203ENST00000615843 KIF26AQ9ULI4 1882 aaPredicted RBP14.22□□□□□ -0.13
SPAST-203ENST00000615843 IGHV4-30-2A0A087WSY4 118 aa14.21□□□□□ -0.14
SPAST-203ENST00000615843 ATP5EP2Q5VTU8 51 aa14.21□□□□□ -0.14
SPAST-203ENST00000615843 IMUPQ9GZP8 106 aa14.2□□□□□ -0.14
SPAST-203ENST00000615843 PCNX3Q9H6A9 2034 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms