RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442	CAMP	P49913	170 aa		7.25	□□□□□ -1.25
PVT1-223	ENST00000615442	MRPL54	Q6P161	138 aa	Known RBP	7.25	□□□□□ -1.25
PVT1-223	ENST00000615442	RASL11A	Q6T310	242 aa		7.25	□□□□□ -1.25
PVT1-223	ENST00000615442	GATD1	Q8NB37	220 aa		7.25	□□□□□ -1.25
PVT1-223	ENST00000615442	NEXN-AS1	Q8NBZ9	246 aa		7.25	□□□□□ -1.25
PVT1-223	ENST00000615442	TNFRSF18	Q9Y5U5	241 aa		7.25	□□□□□ -1.25
PVT1-223	ENST00000615442	UBE2D3	P61077	147 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	UBE2D2	P62837	147 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	FAM104B	Q5XKR9	115 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	MRAP2	Q96G30	205 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	RNF185	Q96GF1	192 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	UPK3B	Q9BT76	320 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	GTSF1L	Q9H1H1	148 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	NIT2	Q9NQR4	276 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	MRPS16	Q9Y3D3	137 aa	Known RBP	7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	CSMD3	Q7Z407	3707 aa		7.24	□□□□□ -1.25
PVT1-223	ENST00000615442	STARD9	Q9P2P6	4700 aa		7.23	□□□□□ -1.25
PVT1-223	ENST00000615442	DAZ4	Q86SG3	579 aa	Known RBP	7.23	□□□□□ -1.25
PVT1-223	ENST00000615442	AMN1	Q8IY45	258 aa		7.23	□□□□□ -1.25
PVT1-223	ENST00000615442	DAZ3	Q9NR90	486 aa	Known RBP	7.23	□□□□□ -1.25
PVT1-223	ENST00000615442	TRAV26-2	A0A0B4J265	109 aa		7.22	□□□□□ -1.25
PVT1-223	ENST00000615442	PPP1R17	O96001	155 aa		7.22	□□□□□ -1.25
PVT1-223	ENST00000615442	TRAV8-6	A0A0B4J262	113 aa		7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	TRBV6-5	A0A0K0K1A5	114 aa		7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	MRPL51	Q4U2R6	128 aa	Known RBP	7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	TMEM97	Q5BJF2	176 aa		7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	LELP1	Q5T871	98 aa		7.21	□□□□□ -1.26
PVT1-223	ENST00000615442		Q9H8V8	135 aa		7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	NACA	E9PAV3	2078 aa		7.21	□□□□□ -1.26
PVT1-223	ENST00000615442	PPBP	P02775	128 aa		7.2	□□□□□ -1.26
PVT1-223	ENST00000615442	COX19	Q49B96	90 aa		7.2	□□□□□ -1.26
PVT1-223	ENST00000615442	OR10J3	Q5JRS4	329 aa		7.2	□□□□□ -1.26
PVT1-223	ENST00000615442	RPL39L	Q96EH5	51 aa	Known RBP	7.2	□□□□□ -1.26
PVT1-223	ENST00000615442	URGCP-MRPS24	S4R325	110 aa		7.2	□□□□□ -1.26
PVT1-223	ENST00000615442	TRBV24-1	A0A075B6N3	115 aa		7.19	□□□□□ -1.26
PVT1-223	ENST00000615442	SIVA1	O15304	175 aa		7.19	□□□□□ -1.26
PVT1-223	ENST00000615442	GAS8-AS1	O95177	125 aa		7.19	□□□□□ -1.26
PVT1-223	ENST00000615442	CKS2	P33552	79 aa		7.19	□□□□□ -1.26
PVT1-223	ENST00000615442	ATRAID	Q6UW56	229 aa		7.19	□□□□□ -1.26
PVT1-223	ENST00000615442	ST20	Q9HBF5	79 aa		7.19	□□□□□ -1.26
PVT1-223	ENST00000615442	TRBV6-8	A0A0A6YYG3	113 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	IGHV3-38	A0A0C4DH36	116 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442		K7EP13	123 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	RPS10	P46783	165 aa	Known RBP	7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	ELOB	Q15370	118 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	TMEM136	Q6ZRR5	245 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	NRAC	Q8N912	160 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	GNB1L	Q9BYB4	327 aa		7.18	□□□□□ -1.26
PVT1-223	ENST00000615442	TRAV9-2	A0A087WT02	112 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	NBDY	A0A0U1RRE5	68 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	SDHAF1	A6NFY7	115 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442		D6R8Y8	96 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	SMKR1	H3BMG3	65 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442		I3L3M4	83 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	PHOX2A	O14813	284 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	NCR2	O95944	276 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	HLA-DQA1	P01909	254 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	DNAH10OS	P0CZ25	163 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	POLR2K	P53803	58 aa	Known RBP	7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	WFDC10B	Q8IUB3	73 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	ORMDL3	Q8N138	153 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	C20orf78	Q9BR46	151 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	SMCO4	Q9NRQ5	59 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	LAMTOR2	Q9Y2Q5	125 aa		7.17	□□□□□ -1.26
PVT1-223	ENST00000615442	IGLV2-18	A0A075B6J9	118 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	TRBV27	A0A0K0K1C4	114 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	VCY	O14598	125 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	TNFRSF6B	O95407	300 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	APCS	P02743	223 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	MT-ND6	P03923	174 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	PMCH	P20382	165 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	SUMO2	P61956	95 aa	Known RBP	7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	RPL32	P62910	135 aa	Known RBP	7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	COTL1	Q14019	142 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	IQCJ	Q1A5X6	159 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	TTC32	Q5I0X7	151 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	LINC01556	Q5JQF7	62 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442		Q6ZR54	194 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	NTM-AS1	Q6ZSK4	140 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	TMEM70	Q9BUB7	260 aa		7.16	□□□□□ -1.26
PVT1-223	ENST00000615442	TENM2	Q9NT68	2774 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	PLEC	Q15149	4684 aa	Known RBP	7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	TRBV25-1	A0A075B6N4	114 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	IGHV1-24	A0A0C4DH33	117 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	PRSS47	A8MTI9	375 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	PKIA	P61925	76 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	PRELID3A	Q96N28	172 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442	YPEL4	Q96NS1	127 aa		7.15	□□□□□ -1.26
PVT1-223	ENST00000615442		M0R2N4	97 aa		7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	NPY	P01303	97 aa		7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	BTF3	P20290	206 aa	Known RBP	7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	NIT1	Q86X76	327 aa		7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	C10orf126	Q8N4M7	172 aa		7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	CHCHD5	Q9BSY4	110 aa		7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	CHCHD7	Q9BUK0	85 aa		7.14	□□□□□ -1.27
PVT1-223	ENST00000615442	TCAP	O15273	167 aa		7.13	□□□□□ -1.27
PVT1-223	ENST00000615442	TSHB	P01222	138 aa		7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms