RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 LY96Q9Y6Y9 160 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 PDE6DO43924 150 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 P01737 135 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 FER1L6-AS1Q8NA97 138 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 PGLYRP4Q96LB8 373 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 A8MWV9 139 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 ADCYAP1P18509 176 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 LINC01551Q86U37 167 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 RPL39LQ96EH5 51 aaKnown RBP3.81□□□□□ -1.8
CPNE3-208ENST00000614678 GTSF1LQ9H1H1 148 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 C5orf52A6NGY3 159 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 SUMO4Q6EEV6 95 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 PRADC1Q9BSG0 188 aa3.81□□□□□ -1.8
CPNE3-208ENST00000614678 OR5AL1P0C617 328 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 ZFP82Q8N141 532 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 SMIM7Q9BQ49 75 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 GFRA4Q9GZZ7 299 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 FLG2Q5D862 2391 aaPredicted RBP3.8□□□□□ -1.8
CPNE3-208ENST00000614678 SMKR1H3BMG3 65 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 UBE2D3P61077 147 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 UBE2D2P62837 147 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 MPV17L2Q567V2 206 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 TXNDC17Q9BRA2 123 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 TCEAL7Q9BRU2 100 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 C16orf90A8MZG2 172 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 M0QY20 66 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 IFNA1P01562 189 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 BLOC1S1P78537 153 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 SLAQ13239 276 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 ZFP2Q6ZN57 461 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 DAZAP1Q96EP5 407 aaKnown RBP3.8□□□□□ -1.8
CPNE3-208ENST00000614678 C14orf144Q96I85 54 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 KLK12Q9UKR0 248 aa3.8□□□□□ -1.8
CPNE3-208ENST00000614678 HERC1Q15751 4861 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 ZNF727A8MUV8 499 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 RPS10P46783 165 aaKnown RBP3.79□□□□□ -1.8
CPNE3-208ENST00000614678 ERVFC1-1P60608 527 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 TWIST1Q15672 202 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 CDPF1Q6NVV7 123 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 RPP21Q9H633 154 aaKnown RBP3.79□□□□□ -1.8
CPNE3-208ENST00000614678 IFITM10A6NMD0 228 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 LINC00336Q6ZUF6 198 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 SYT8Q8NBV8 401 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 PTH2Q96A98 100 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 TRBV7-3A0A075B6L6 115 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 KRTAP10-1P60331 282 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 RPL23P62829 140 aaKnown RBP3.79□□□□□ -1.8
CPNE3-208ENST00000614678 LELP1Q5T871 98 aa3.79□□□□□ -1.8
CPNE3-208ENST00000614678 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-208ENST00000614678 A0A087WTM6 91 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 NCR2O95944 276 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 S100A9P06702 114 aaKnown RBP3.78□□□□□ -1.8
CPNE3-208ENST00000614678 FAM3BP58499 235 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-208ENST00000614678 GAGE6Q13070 117 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 NIT1Q86X76 327 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 FAM30AQ9NZY2 134 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 V9GYV3 84 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 A0A1B0GV90 55 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 MED14OSP0DP75 135 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 BAALCQ8WXS3 180 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 IGLV4-60A0A075B6I1 120 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 HIGD1CA8MV81 97 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 TMEM250H0YL14 139 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 ADIRFQ15847 76 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 LINC01556Q5JQF7 62 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 C15orf54Q8N8G6 183 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
CPNE3-208ENST00000614678 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
CPNE3-208ENST00000614678 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.81
CPNE3-208ENST00000614678 TMEM262E9PQX1 116 aa3.78□□□□□ -1.81
CPNE3-208ENST00000614678 CTRLP40313 264 aa3.78□□□□□ -1.81
CPNE3-208ENST00000614678 ENHOQ6UWT2 76 aa3.78□□□□□ -1.81
CPNE3-208ENST00000614678 AMN1Q8IY45 258 aa3.78□□□□□ -1.81
CPNE3-208ENST00000614678 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-208ENST00000614678 SOHLH1Q5JUK2 328 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 ISOC2Q96AB3 205 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 UBE2WQ96B02 151 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 TRBV6-8A0A0A6YYG3 113 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 IBA57-AS1B1ANH7 110 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 RAB4BP61018 213 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 RNF185Q96GF1 192 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 AP1S3Q96PC3 154 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 COLCA2A8K830 154 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
CPNE3-208ENST00000614678 RHODO00212 210 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 XGP55808 180 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 RPL36AP83881 106 aaKnown RBP3.76□□□□□ -1.81
CPNE3-208ENST00000614678 TTC32Q5I0X7 151 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 PIK3CD-AS1Q5SR53 167 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 NTN5Q8WTR8 489 aaPredicted RBP3.76□□□□□ -1.81
CPNE3-208ENST00000614678 RPL36ALQ969Q0 106 aaKnown RBP3.76□□□□□ -1.81
CPNE3-208ENST00000614678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
CPNE3-208ENST00000614678 TRAV8-6A0A0B4J262 113 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
CPNE3-208ENST00000614678 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 BIN3Q9NQY0 253 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 IGKV3OR2-268A0A0C4DH90 116 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms