RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
CHD1-212ENST00000614616 ZNF524Q96C55 264 aa10.65□□□□□ -0.7
CHD1-212ENST00000614616 A6NED7 52 aa10.65□□□□□ -0.71
CHD1-212ENST00000614616 IGKV2D-26A0A0A0MRZ7 120 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 LINC00526Q96FQ7 95 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 XCL2Q9UBD3 114 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 I3L2K1 104 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 IGHV3-30P01768 117 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 IGHV3-30-5P0DP03 117 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 INSL3P51460 131 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 A0A0J9YY99 117 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 LOXL1Q08397 574 aaPredicted RBP10.64□□□□□ -0.71
CHD1-212ENST00000614616 TRBV7-3A0A075B6L6 115 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 PSCAO43653 123 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 SEC61GP60059 68 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 Q0VFX4 171 aa10.64□□□□□ -0.71
CHD1-212ENST00000614616 COL4A3Q01955 1670 aa10.63□□□□□ -0.71
CHD1-212ENST00000614616 ARTNQ5T4W7 220 aa10.63□□□□□ -0.71
CHD1-212ENST00000614616 PRR15LQ9BU68 103 aa10.63□□□□□ -0.71
CHD1-212ENST00000614616 MBD3L4A6NDZ8 208 aaPredicted RBP10.63□□□□□ -0.71
CHD1-212ENST00000614616 MBD3L3A6NE82 208 aaPredicted RBP10.63□□□□□ -0.71
CHD1-212ENST00000614616 MBD3L5A6NJ08 208 aaPredicted RBP10.63□□□□□ -0.71
CHD1-212ENST00000614616 CLPSL2Q6UWE3 100 aa10.63□□□□□ -0.71
CHD1-212ENST00000614616 MBD3L2Q8NHZ7 208 aaPredicted RBP10.63□□□□□ -0.71
CHD1-212ENST00000614616 MDS2Q8NDY4 140 aa10.63□□□□□ -0.71
CHD1-212ENST00000614616 MAPKAPK5-AS1Q8N8E1 139 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 VWCEQ96DN2 955 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 BPY2O14599 106 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 SNURFQ9Y675 71 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 IGKV1OR2-108A0A075B7D4 117 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 USP17L23D6RBM5 183 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 MIR7-3HGQ8N6C7 128 aa10.62□□□□□ -0.71
CHD1-212ENST00000614616 IGHV4-4A0A075B6R2 117 aa10.61□□□□□ -0.71
CHD1-212ENST00000614616 K7EQD1 137 aa10.61□□□□□ -0.71
CHD1-212ENST00000614616 H3BUA1 57 aa10.61□□□□□ -0.71
CHD1-212ENST00000614616 LHBP01229 141 aa10.61□□□□□ -0.71
CHD1-212ENST00000614616 GNLYP22749 145 aa10.61□□□□□ -0.71
CHD1-212ENST00000614616 DSCR9P59020 149 aa10.61□□□□□ -0.71
CHD1-212ENST00000614616 H7C423 109 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 LTBP2Q14767 1821 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 K7EIM0 57 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 RETNQ9HD89 108 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 G3V318 75 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 DIRC1Q969H9 104 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 FGF23Q9GZV9 251 aaPredicted RBP10.6□□□□□ -0.71
CHD1-212ENST00000614616 A0A0G2JNJ9 132 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 Q9UFV3 132 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 UBE2AP49459 152 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 PRO0628Q9UI54 55 aa10.6□□□□□ -0.71
CHD1-212ENST00000614616 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 SPRY4Q9C004 299 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 NCR3O14931 201 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 MLST8Q9BVC4 326 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 PROK2Q9HC23 129 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 LST1O00453 97 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 SHISA2Q6UWI4 295 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 NPBQ8NG41 125 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 MBD6Q96DN6 1003 aa10.59□□□□□ -0.71
CHD1-212ENST00000614616 COL8A2P25067 703 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 ZNF503-AS2A6NEH8 195 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 IGKV1-17P01599 117 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 IGLV1-44P01699 117 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 KAAG1Q9UBP8 84 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 Q8N976 141 aa10.58□□□□□ -0.72
CHD1-212ENST00000614616 LINC00322Q6ZN03 302 aaPredicted RBP10.57□□□□□ -0.72
CHD1-212ENST00000614616 TRAV7A0A075B6U4 112 aa10.57□□□□□ -0.72
CHD1-212ENST00000614616 ETDCA0A1B0GVM5 59 aa10.57□□□□□ -0.72
CHD1-212ENST00000614616 IGLV11-55A0A075B6I3 123 aa10.57□□□□□ -0.72
CHD1-212ENST00000614616 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
CHD1-212ENST00000614616 LOXP28300 417 aaPredicted RBP10.56□□□□□ -0.72
CHD1-212ENST00000614616 NDUFA1O15239 70 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 P0C879 139 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 ODF3L1Q8IXM7 274 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
CHD1-212ENST00000614616 COL4A6Q14031 1691 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 IGLV3-9A0A075B6K5 115 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 E7EQL1 145 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 NSUN5P1Q3KNT7 163 aa10.56□□□□□ -0.72
CHD1-212ENST00000614616 Q6JHZ5 121 aa10.55□□□□□ -0.72
CHD1-212ENST00000614616 LOC107984640A0A0U1RRK4 108 aa10.55□□□□□ -0.72
CHD1-212ENST00000614616 C11orf53Q8IXP5 236 aa10.55□□□□□ -0.72
CHD1-212ENST00000614616 GATA3P23771 443 aa10.54□□□□□ -0.72
CHD1-212ENST00000614616 RMI2Q96E14 147 aa10.54□□□□□ -0.72
CHD1-212ENST00000614616 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
CHD1-212ENST00000614616 B4DSR2 109 aa10.54□□□□□ -0.72
CHD1-212ENST00000614616 TMEM263Q8WUH6 116 aaKnown RBP10.54□□□□□ -0.72
CHD1-212ENST00000614616 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
CHD1-212ENST00000614616 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
CHD1-212ENST00000614616 SPRY2O43597 315 aa10.53□□□□□ -0.72
CHD1-212ENST00000614616 MIFP14174 115 aa10.53□□□□□ -0.72
CHD1-212ENST00000614616 EPOPA6NHQ4 379 aa10.52□□□□□ -0.72
CHD1-212ENST00000614616 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.72
CHD1-212ENST00000614616 TIRAPP58753 221 aa10.52□□□□□ -0.73
CHD1-212ENST00000614616 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
CHD1-212ENST00000614616 PPDPFQ9H3Y8 114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms