RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 Q6Q795 121 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 ZNF580Q9UK33 172 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 A0A0J9YY99 117 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 SCGB1C2P0DMR2 95 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 PSMB8P28062 276 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 HERVK_113P61574 105 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 GAGE2EQ4V326 116 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 KIR2DL4Q99706 377 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 GAGE2DQ9UEU5 116 aa9.47□□□□□ -0.89
PCDHGA4-202ENST00000612927 DOPEY2Q9Y3R5 2298 aa9.46□□□□□ -0.89
PCDHGA4-202ENST00000612927 SNCGO76070 127 aa9.46□□□□□ -0.89
PCDHGA4-202ENST00000612927 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.89
PCDHGA4-202ENST00000612927 CITED2Q99967 270 aaPredicted RBP9.46□□□□□ -0.89
PCDHGA4-202ENST00000612927 MXRA5Q9NR99 2828 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 GAGE12JA6NER3 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 GAGE7O76087 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 CFC1P0CG37 223 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 GAGE12FP0CL80 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 GAGE12GP0CL81 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 GAGE12IP0CL82 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 GAGE4Q13068 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 LRRC75A-AS1Q8N1F1 130 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 Q96MF0 132 aa9.46□□□□□ -0.9
PCDHGA4-202ENST00000612927 SLC25A20O43772 301 aa9.45□□□□□ -0.9
PCDHGA4-202ENST00000612927 KRTAP1-3Q8IUG1 177 aa9.45□□□□□ -0.9
PCDHGA4-202ENST00000612927 PRO1854Q9UHT4 67 aa9.45□□□□□ -0.9
PCDHGA4-202ENST00000612927 IGHV3-30P01768 117 aa9.45□□□□□ -0.9
PCDHGA4-202ENST00000612927 IGHV3-30-5P0DP03 117 aa9.45□□□□□ -0.9
PCDHGA4-202ENST00000612927 M0R381 172 aa9.44□□□□□ -0.9
PCDHGA4-202ENST00000612927 Q6YL49 198 aa9.44□□□□□ -0.9
PCDHGA4-202ENST00000612927 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
PCDHGA4-202ENST00000612927 WIPF1O43516 503 aa9.44□□□□□ -0.9
PCDHGA4-202ENST00000612927 LINC00477Q96M19 166 aa9.44□□□□□ -0.9
PCDHGA4-202ENST00000612927 NAV2Q8IVL1 2488 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 OVOL1O14753 267 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 IFITM1P13164 125 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 SLC25A29Q8N8R3 303 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 KLHL30-AS1Q8NEE0 82 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
PCDHGA4-202ENST00000612927 PPP1R17O96001 155 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 ANXA2RQ3ZCQ2 193 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 DPH3P1Q9H4G8 78 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 ZNF702PQ9H963 129 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
PCDHGA4-202ENST00000612927 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 C9JAW5 83 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 P0DMU3 169 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 CREBBPQ92793 2442 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 GNRH2O43555 120 aa9.41□□□□□ -0.9
PCDHGA4-202ENST00000612927 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 K7EMT4 169 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 CRYGDP07320 174 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 FAM19A4Q96LR4 140 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 DUX5Q96PT3 197 aa9.4□□□□□ -0.9
PCDHGA4-202ENST00000612927 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 PHLDA3Q9Y5J5 127 aa9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 PMVKQ15126 192 aa9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 DCANP1Q8TF63 244 aa9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
PCDHGA4-202ENST00000612927 NBPF19A0A087WUL8 3843 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 Q8N1Y9 231 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 TLN2Q9Y4G6 2542 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 CRLF1O75462 422 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 ATXN8Q156A1 80 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 APCP25054 2843 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 DUSP14O95147 198 aaKnown RBP9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 MGPP08493 103 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
PCDHGA4-202ENST00000612927 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA4-202ENST00000612927 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms