RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 DNAH2Q9P225 4427 aa7.76□□□□□ -1.17
CCL3L3-201ENST00000612839 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 GAGE12JA6NER3 117 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 NTF3P20783 257 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 LINC00315P59091 139 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 RAB4BP61018 213 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 GAGE1Q13065 139 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 GAGE4Q13068 117 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 GAGE5Q13069 117 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 GAGE13Q4V321 117 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 CT83Q5H943 113 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 YPEL4Q96NS1 127 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 CTDSP1Q9GZU7 261 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 OSTCQ9NRP0 149 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 FRAS1Q86XX4 4008 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 COLCA2A8K830 154 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 A8MWL6 223 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 MT-ND4LP03901 98 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 ZNF56Q15929 161 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 WDR73Q6P4I2 378 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 V9GYV3 84 aa7.75□□□□□ -1.17
CCL3L3-201ENST00000612839 TRBV10-1A0A0K0K1A3 114 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 SIVA1O15304 175 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 SMIM17P0DL12 118 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 EVI2AP22794 236 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 FOXA3P55318 350 aaPredicted RBP7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 TIRAPP58753 221 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 WFDC10BQ8IUB3 73 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 C15orf54Q8N8G6 183 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 ATP6V0E2Q8NHE4 81 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 ANAPC16Q96DE5 110 aa7.74□□□□□ -1.17
CCL3L3-201ENST00000612839 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 F5H697 171 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 TWIST1Q15672 202 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 OR10G8Q8NGN5 311 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 TSKUQ8WUA8 353 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 PGLYRP4Q96LB8 373 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 GFRA4Q9GZZ7 299 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 GTSF1LQ9H1H1 148 aa7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
CCL3L3-201ENST00000612839 TRBV7-3A0A075B6L6 115 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 FAM231BA6NCW3 169 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 HIGD1CA8MV81 97 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 PPP1R2P9O14990 202 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 RTL8CO15255 209 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 ELOBQ15370 118 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 URGCP-MRPS24S4R325 110 aa7.72□□□□□ -1.17
CCL3L3-201ENST00000612839 MGPP08493 103 aa7.71□□□□□ -1.18
CCL3L3-201ENST00000612839 RPL36AP83881 106 aaKnown RBP7.71□□□□□ -1.18
CCL3L3-201ENST00000612839 TTC32Q5I0X7 151 aa7.71□□□□□ -1.18
CCL3L3-201ENST00000612839 NEXN-AS1Q8NBZ9 246 aa7.71□□□□□ -1.18
CCL3L3-201ENST00000612839 RPL36ALQ969Q0 106 aaKnown RBP7.71□□□□□ -1.18
CCL3L3-201ENST00000612839 DPH3P1Q9H4G8 78 aa7.71□□□□□ -1.18
CCL3L3-201ENST00000612839 M0QY20 66 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 DNAH10OSP0CZ25 163 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 UBE2D3P61077 147 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 UBE2D2P62837 147 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 LELP1Q5T871 98 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 C1orf134Q5TEV5 83 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 SUMO4Q6EEV6 95 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
CCL3L3-201ENST00000612839 TGIF2-C20orf24A0A0A6YYL0 155 aa7.69□□□□□ -1.18
CCL3L3-201ENST00000612839 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
CCL3L3-201ENST00000612839 C6orf223Q8N319 242 aa7.69□□□□□ -1.18
CCL3L3-201ENST00000612839 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
CCL3L3-201ENST00000612839 TRAV8-6A0A0B4J262 113 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 IGHV3-38A0A0C4DH36 116 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 SMIM27A0A1W2PRY6 76 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 BORCS7Q96B45 105 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 IMMP2LQ96T52 175 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 TRBV24-1A0A075B6N3 115 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 H7C1H1 209 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 RAB5AP20339 215 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 LINC00336Q6ZUF6 198 aa7.68□□□□□ -1.18
CCL3L3-201ENST00000612839 DNAH17Q9UFH2 4485 aa7.67□□□□□ -1.18
CCL3L3-201ENST00000612839 S100PP25815 95 aa7.67□□□□□ -1.18
CCL3L3-201ENST00000612839 LINC01556Q5JQF7 62 aa7.67□□□□□ -1.18
CCL3L3-201ENST00000612839 RASL11AQ6T310 242 aa7.67□□□□□ -1.18
CCL3L3-201ENST00000612839 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
CCL3L3-201ENST00000612839 DNAJC30Q96LL9 226 aa7.67□□□□□ -1.18
CCL3L3-201ENST00000612839 TRAV9-2A0A087WT02 112 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 PRSS29PA6NIE9 313 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 K7EP13 123 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 BTF3P20290 206 aaKnown RBP7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 KCNIP4Q6PIL6 250 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 TMEM191AQ9H0A3 160 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 NIT2Q9NQR4 276 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 TNFRSF18Q9Y5U5 241 aa7.66□□□□□ -1.18
CCL3L3-201ENST00000612839 TRBV6-8A0A0A6YYG3 113 aa7.65□□□□□ -1.18
CCL3L3-201ENST00000612839 RIGQ13278 110 aa7.65□□□□□ -1.18
CCL3L3-201ENST00000612839 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
CCL3L3-201ENST00000612839 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms