RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
POLR2J3-219ENST00000608621 MBD3L1Q8WWY6 194 aa8.67□□□□□ -1.02
POLR2J3-219ENST00000608621 MLST8Q9BVC4 326 aa8.67□□□□□ -1.02
POLR2J3-219ENST00000608621 A0A1B0GV50 99 aa8.66□□□□□ -1.02
POLR2J3-219ENST00000608621 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
POLR2J3-219ENST00000608621 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
POLR2J3-219ENST00000608621 PRSS1P07477 247 aa8.66□□□□□ -1.02
POLR2J3-219ENST00000608621 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
POLR2J3-219ENST00000608621 SMLR1H3BR10 107 aa8.65□□□□□ -1.02
POLR2J3-219ENST00000608621 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
POLR2J3-219ENST00000608621 PKIAP61925 76 aa8.65□□□□□ -1.02
POLR2J3-219ENST00000608621 MIAQ16674 131 aa8.65□□□□□ -1.02
POLR2J3-219ENST00000608621 TMUB2Q71RG4 321 aa8.65□□□□□ -1.02
POLR2J3-219ENST00000608621 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
POLR2J3-219ENST00000608621 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.03
POLR2J3-219ENST00000608621 PFDN1O60925 122 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 RBX1P62877 108 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 GAGE6Q13070 117 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 DGAT2L7PQ6IED9 249 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 KCNRGQ8N5I3 272 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
POLR2J3-219ENST00000608621 UMAD1C9J7I0 102 aa8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 SMIM17P0DL12 118 aa8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 KRTAP26-1Q6PEX3 210 aa8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
POLR2J3-219ENST00000608621 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
POLR2J3-219ENST00000608621 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
POLR2J3-219ENST00000608621 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-219ENST00000608621 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-219ENST00000608621 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
POLR2J3-219ENST00000608621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-219ENST00000608621 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 GZMBP10144 247 aa8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 RPL35P42766 123 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 ZNF345Q14585 488 aa8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 IQCJQ1A5X6 159 aa8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 RGS21Q2M5E4 152 aa8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
POLR2J3-219ENST00000608621 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 IGLV10-54A0A075B6I4 117 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 PANO1I0J062 215 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 M0QY20 66 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 MGPP08493 103 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 REG3AQ06141 175 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 TPPP3Q9BW30 176 aa8.59□□□□□ -1.03
POLR2J3-219ENST00000608621 A0A0D9SG52 128 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 HMSDA8MTL9 139 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 CCL20P78556 96 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 FER1L6-AS1Q8NA97 138 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
POLR2J3-219ENST00000608621 H7C1H1 209 aa8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 BCL2L11O43521 198 aa8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 NKX2-5P52952 324 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 GNG13Q9P2W3 67 aa8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
POLR2J3-219ENST00000608621 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 RAB19A4D1S5 217 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 P01737 135 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 RAB5CP51148 216 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 CACNG7P62955 275 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 EIF5AP63241 154 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 C11orf52Q96A22 123 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 MANBALQ9NQG1 85 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
POLR2J3-219ENST00000608621 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 C19orf71A6NCJ1 209 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 CENPWQ5EE01 88 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 GFRA4Q9GZZ7 299 aa8.55□□□□□ -1.04
POLR2J3-219ENST00000608621 SLPIP03973 132 aa8.54□□□□□ -1.04
POLR2J3-219ENST00000608621 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
POLR2J3-219ENST00000608621 NIT2Q9NQR4 276 aa8.54□□□□□ -1.04
POLR2J3-219ENST00000608621 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
POLR2J3-219ENST00000608621 TRAV1-1A0A0B4J248 108 aa8.53□□□□□ -1.04
POLR2J3-219ENST00000608621 XKRY2A2RUG3 117 aa8.53□□□□□ -1.04
POLR2J3-219ENST00000608621 F2Z2F3 143 aa8.53□□□□□ -1.04
POLR2J3-219ENST00000608621 NTF3P20783 257 aa8.53□□□□□ -1.04
POLR2J3-219ENST00000608621 CIRBPQ14011 172 aaKnown RBP8.53□□□□□ -1.04
POLR2J3-219ENST00000608621 IGHV3-64A0A075B6Q5 118 aa8.52□□□□□ -1.05
POLR2J3-219ENST00000608621 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
POLR2J3-219ENST00000608621 UBE2L6O14933 153 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms