RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CEBPGP53567 150 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 RAB4BP61018 213 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 RPL36AP83881 106 aaKnown RBP12.91□□□□□ -0.34
SGMS1-208ENST00000608287 NUDT10Q8NFP7 164 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 OCC1Q8TAD7 63 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 RPL36ALQ969Q0 106 aaKnown RBP12.91□□□□□ -0.34
SGMS1-208ENST00000608287 NUDT11Q96G61 164 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 EIF5A2Q9GZV4 153 aaKnown RBP12.91□□□□□ -0.34
SGMS1-208ENST00000608287 PLA2G2DQ9UNK4 145 aa12.91□□□□□ -0.34
SGMS1-208ENST00000608287 F5H697 171 aa12.9□□□□□ -0.34
SGMS1-208ENST00000608287 K7EN84 100 aa12.9□□□□□ -0.34
SGMS1-208ENST00000608287 A0A087WWC5 75 aa12.89□□□□□ -0.35
SGMS1-208ENST00000608287 NTN5Q8WTR8 489 aaPredicted RBP12.89□□□□□ -0.35
SGMS1-208ENST00000608287 RNASE7Q9H1E1 156 aaKnown RBP12.89□□□□□ -0.35
SGMS1-208ENST00000608287 TRBV7-3A0A075B6L6 115 aa12.88□□□□□ -0.35
SGMS1-208ENST00000608287 F2Z2F3 143 aa12.88□□□□□ -0.35
SGMS1-208ENST00000608287 CACNG7P62955 275 aa12.88□□□□□ -0.35
SGMS1-208ENST00000608287 FAM210AQ96ND0 272 aa12.88□□□□□ -0.35
SGMS1-208ENST00000608287 IGLV5-52A0A0A0MRZ9 124 aa12.87□□□□□ -0.35
SGMS1-208ENST00000608287 UBE2D3P61077 147 aa12.87□□□□□ -0.35
SGMS1-208ENST00000608287 UBE2D2P62837 147 aa12.87□□□□□ -0.35
SGMS1-208ENST00000608287 LYZL1Q6UWQ5 148 aa12.87□□□□□ -0.35
SGMS1-208ENST00000608287 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
SGMS1-208ENST00000608287 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
SGMS1-208ENST00000608287 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
SGMS1-208ENST00000608287 OR10G8Q8NGN5 311 aa12.86□□□□□ -0.35
SGMS1-208ENST00000608287 KIF25-AS1Q9Y6Z4 181 aa12.86□□□□□ -0.35
SGMS1-208ENST00000608287 MGPP08493 103 aa12.85□□□□□ -0.35
SGMS1-208ENST00000608287 Q8N3U1 123 aa12.85□□□□□ -0.35
SGMS1-208ENST00000608287 SMIM7Q9BQ49 75 aa12.85□□□□□ -0.35
SGMS1-208ENST00000608287 Q9HAA7 133 aa12.85□□□□□ -0.35
SGMS1-208ENST00000608287 PSCAO43653 123 aa12.83□□□□□ -0.36
SGMS1-208ENST00000608287 GATCO43716 136 aaKnown RBP12.83□□□□□ -0.36
SGMS1-208ENST00000608287 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.36
SGMS1-208ENST00000608287 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
SGMS1-208ENST00000608287 NTF3P20783 257 aa12.83□□□□□ -0.36
SGMS1-208ENST00000608287 TEX261Q6UWH6 196 aa12.83□□□□□ -0.36
SGMS1-208ENST00000608287 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
SGMS1-208ENST00000608287 HMCN2Q8NDA2 5059 aa12.83□□□□□ -0.36
SGMS1-208ENST00000608287 SRP19P09132 144 aaKnown RBP12.82□□□□□ -0.36
SGMS1-208ENST00000608287 CTRLP40313 264 aa12.82□□□□□ -0.36
SGMS1-208ENST00000608287 HAMPP81172 84 aa12.82□□□□□ -0.36
SGMS1-208ENST00000608287 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-208ENST00000608287 ZNF727A8MUV8 499 aa12.81□□□□□ -0.36
SGMS1-208ENST00000608287 TWIST1Q15672 202 aa12.81□□□□□ -0.36
SGMS1-208ENST00000608287 WDR73Q6P4I2 378 aa12.81□□□□□ -0.36
SGMS1-208ENST00000608287 DAZ4Q86SG3 579 aaKnown RBP12.81□□□□□ -0.36
SGMS1-208ENST00000608287 DAZ3Q9NR90 486 aaKnown RBP12.81□□□□□ -0.36
SGMS1-208ENST00000608287 H7C1H1 209 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 OXTP01178 125 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 LAGE3Q14657 143 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 SUMO4Q6EEV6 95 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 FAM231DQ6ZW35 169 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 NIT1Q86X76 327 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
SGMS1-208ENST00000608287 A0A087WX48 190 aa12.79□□□□□ -0.36
SGMS1-208ENST00000608287 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
SGMS1-208ENST00000608287 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
SGMS1-208ENST00000608287 GTSF1Q8WW33 167 aa12.79□□□□□ -0.36
SGMS1-208ENST00000608287 A8MWL6 223 aa12.78□□□□□ -0.36
SGMS1-208ENST00000608287 M0QY20 66 aa12.78□□□□□ -0.36
SGMS1-208ENST00000608287 KCNIP4Q6PIL6 250 aa12.78□□□□□ -0.36
SGMS1-208ENST00000608287 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
SGMS1-208ENST00000608287 TMEM262E9PQX1 116 aa12.77□□□□□ -0.37
SGMS1-208ENST00000608287 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.37
SGMS1-208ENST00000608287 DNAJC30Q96LL9 226 aa12.77□□□□□ -0.37
SGMS1-208ENST00000608287 TRAV8-3A0A0A6YYJ7 113 aa12.76□□□□□ -0.37
SGMS1-208ENST00000608287 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
SGMS1-208ENST00000608287 PGLYRP4Q96LB8 373 aa12.76□□□□□ -0.37
SGMS1-208ENST00000608287 TM2D2Q9BX73 214 aa12.76□□□□□ -0.37
SGMS1-208ENST00000608287 TMEM97Q5BJF2 176 aa12.75□□□□□ -0.37
SGMS1-208ENST00000608287 CT83Q5H943 113 aa12.75□□□□□ -0.37
SGMS1-208ENST00000608287 SMIM15Q7Z3B0 74 aa12.75□□□□□ -0.37
SGMS1-208ENST00000608287 CHCHD5Q9BSY4 110 aa12.75□□□□□ -0.37
SGMS1-208ENST00000608287 CHCHD7Q9BUK0 85 aa12.75□□□□□ -0.37
SGMS1-208ENST00000608287 KLK12Q9UKR0 248 aa12.75□□□□□ -0.37
SGMS1-208ENST00000608287 PEA15Q15121 130 aa12.74□□□□□ -0.37
SGMS1-208ENST00000608287 ELOBQ15370 118 aa12.74□□□□□ -0.37
SGMS1-208ENST00000608287 TMEM241Q24JQ0 296 aa12.74□□□□□ -0.37
SGMS1-208ENST00000608287 FAM74A3Q4VXF1 159 aa12.74□□□□□ -0.37
SGMS1-208ENST00000608287 NTM-AS1Q6ZSK4 140 aa12.74□□□□□ -0.37
SGMS1-208ENST00000608287 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
SGMS1-208ENST00000608287 C9JQL5 133 aa12.73□□□□□ -0.37
SGMS1-208ENST00000608287 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
SGMS1-208ENST00000608287 BORCS7Q96B45 105 aa12.73□□□□□ -0.37
SGMS1-208ENST00000608287 NIT2Q9NQR4 276 aa12.73□□□□□ -0.37
SGMS1-208ENST00000608287 OSTCQ9NRP0 149 aa12.73□□□□□ -0.37
SGMS1-208ENST00000608287 TRBV25-1A0A075B6N4 114 aa12.72□□□□□ -0.37
SGMS1-208ENST00000608287 C15orf54Q8N8G6 183 aa12.72□□□□□ -0.37
SGMS1-208ENST00000608287 TSKUQ8WUA8 353 aa12.72□□□□□ -0.37
SGMS1-208ENST00000608287 UBE2WQ96B02 151 aa12.72□□□□□ -0.37
SGMS1-208ENST00000608287 FOXA3P55318 350 aaPredicted RBP12.71□□□□□ -0.37
SGMS1-208ENST00000608287 PKIAP61925 76 aa12.71□□□□□ -0.37
SGMS1-208ENST00000608287 MPV17L2Q567V2 206 aa12.71□□□□□ -0.37
SGMS1-208ENST00000608287 Q8N814 137 aa12.71□□□□□ -0.37
SGMS1-208ENST00000608287 RMI2Q96E14 147 aa12.71□□□□□ -0.37
SGMS1-208ENST00000608287 TRAV26-2A0A0B4J265 109 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
SGMS1-208ENST00000608287 RPL23P62829 140 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms